RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
TROAP-201ENST00000257909 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
TROAP-201ENST00000257909 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
TROAP-201ENST00000257909 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
TROAP-201ENST00000257909 HSP90AB4PQ58FF6 505 aa13.57□□□□□ -0.24
TROAP-201ENST00000257909 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
TROAP-201ENST00000257909 FBXO38Q6PIJ6 1188 aa13.57□□□□□ -0.24
TROAP-201ENST00000257909 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
TROAP-201ENST00000257909 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
TROAP-201ENST00000257909 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
TROAP-201ENST00000257909 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
TROAP-201ENST00000257909 LEO1Q8WVC0 666 aaPredicted RBP13.57□□□□□ -0.24
TROAP-201ENST00000257909 NALCNQ8IZF0 1738 aa13.57□□□□□ -0.24
TROAP-201ENST00000257909 SKILP12757 684 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 PSMA5P28066 241 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 NECAB1Q8N987 351 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 PTH1RQ03431 593 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
TROAP-201ENST00000257909 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
TROAP-201ENST00000257909 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
TROAP-201ENST00000257909 GIGYF1O75420 1035 aaPredicted RBP13.55□□□□□ -0.24
TROAP-201ENST00000257909 NR1I2O75469 434 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 ELF2Q15723 593 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
TROAP-201ENST00000257909 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 TSPOAP1O95153 1857 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 TOPAZ1Q8N9V7 1692 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 IQCB1Q15051 598 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
TROAP-201ENST00000257909 USP27XA6NNY8 438 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 CTAGE5O15320 804 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
TROAP-201ENST00000257909 ZBTB22O15209 634 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
TROAP-201ENST00000257909 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
TROAP-201ENST00000257909 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
TROAP-201ENST00000257909 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
TROAP-201ENST00000257909 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
TROAP-201ENST00000257909 TULP2O00295 520 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 FOXO3O43524 673 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 STX1AQ16623 288 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 DTNBO60941 627 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 GSDMDP57764 484 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 CCZ1BP86790 482 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
TROAP-201ENST00000257909 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 PGBD1Q96JS3 809 aa13.53□□□□□ -0.24
TROAP-201ENST00000257909 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
TROAP-201ENST00000257909 V9GYY5 206 aaPredicted RBP13.53□□□□□ -0.24
TROAP-201ENST00000257909 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
TROAP-201ENST00000257909 ERICH4A6NGS2 130 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 TUBB4AP04350 444 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 H2AFXP16104 143 aaPredicted RBP13.52□□□□□ -0.24
TROAP-201ENST00000257909 CYP2C19P33261 490 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.24
TROAP-201ENST00000257909 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 AGLP35573 1532 aa13.52□□□□□ -0.24
TROAP-201ENST00000257909 BECN2A8MW95 431 aa13.52□□□□□ -0.25
TROAP-201ENST00000257909 HIP1O00291 1037 aa13.52□□□□□ -0.25
TROAP-201ENST00000257909 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
TROAP-201ENST00000257909 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
TROAP-201ENST00000257909 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
TROAP-201ENST00000257909 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
TROAP-201ENST00000257909 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 TECPR2O15040 1411 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 CLASRPQ8N2M8 674 aaKnown RBP13.51□□□□□ -0.25
TROAP-201ENST00000257909 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 ZNF446Q9NWS9 450 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 KDRP35968 1356 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 ERBB3P21860 1342 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
TROAP-201ENST00000257909 TRMT1Q9NXH9 659 aaKnown RBP13.51□□□□□ -0.25
TROAP-201ENST00000257909 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
TROAP-201ENST00000257909 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
TROAP-201ENST00000257909 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
TROAP-201ENST00000257909 IMPACTQ9P2X3 320 aa13.5□□□□□ -0.25
TROAP-201ENST00000257909 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
TROAP-201ENST00000257909 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
TROAP-201ENST00000257909 C11orf57Q6ZUT1 292 aaPredicted RBP13.5□□□□□ -0.25
TROAP-201ENST00000257909 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
TROAP-201ENST00000257909 SLC27A2O14975 620 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 RPS6KB1P23443 525 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
TROAP-201ENST00000257909 ANO10Q9NW15 660 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms