RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 LGR6Q9HBX8 967 aa11.86□□□□□ -0.51
SEMA6A-201ENST00000257414 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 PPFIA3O75145 1194 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 ARHGEF40Q8TER5 1519 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 CCT2P78371 535 aaKnown RBP11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 PPLO60437 1756 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 TNNT1P13805 278 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 CREBRFQ8IUR6 639 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 BRF1Q92994 677 aa11.85□□□□□ -0.51
SEMA6A-201ENST00000257414 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 A0A087WZG4 1122 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ZDHHC9Q9Y397 364 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 COL3A1P02461 1466 aaPredicted RBP11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ATF3P18847 181 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ROBO2Q9HCK4 1378 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
SEMA6A-201ENST00000257414 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.51
SEMA6A-201ENST00000257414 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.51
SEMA6A-201ENST00000257414 SLC39A6Q13433 755 aa11.83□□□□□ -0.51
SEMA6A-201ENST00000257414 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.51
SEMA6A-201ENST00000257414 RASEFQ8IZ41 740 aa11.83□□□□□ -0.51
SEMA6A-201ENST00000257414 USP32Q8NFA0 1604 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 ANO10Q9NW15 660 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 CEP126Q9P2H0 1117 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 PTGS1P23219 599 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 OLFM4Q6UX06 510 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 LUZP1Q86V48 1076 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 DNAJC25Q9H1X3 360 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 USP6P35125 1406 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 GOLIM4O00461 696 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 HMGB1P09429 215 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 KCNA6P17658 529 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 LTKP29376 864 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.52
SEMA6A-201ENST00000257414 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 CTAGE5O15320 804 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 HOXB7P09629 217 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 PTH1RQ03431 593 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 IP6K1Q92551 441 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 Q6ZUG5 572 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 CTNNA3Q9UI47 895 aa11.82□□□□□ -0.52
SEMA6A-201ENST00000257414 SLC27A2O14975 620 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 STX1AQ16623 288 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 PDILTQ8N807 584 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 KCNQ3O43525 872 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 LSG1Q9H089 658 aaKnown RBP11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 TRMT1Q9NXH9 659 aaKnown RBP11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 SERPINC1P01008 464 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 EVA1CP58658 441 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
SEMA6A-201ENST00000257414 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 ATP2B1P20020 1258 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 ME3Q16798 604 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 MTMR6Q9Y217 621 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 CAVIN2O95810 425 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 IMMTQ16891 758 aaKnown RBP11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 MYRIPQ8NFW9 859 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms