RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.92
NME3-201ENST00000219302 RIC1Q4ADV7 1423 aa20.82■□□□□ 0.92
NME3-201ENST00000219302 EAPPQ56P03 285 aaPredicted RBP20.82■□□□□ 0.92
NME3-201ENST00000219302 GIGYF2Q6Y7W6 1299 aaKnown RBP20.82■□□□□ 0.92
NME3-201ENST00000219302 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
NME3-201ENST00000219302 ERBB4Q15303 1308 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 NTSR2O95665 410 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 PDIA6Q15084 440 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 PNMA8AQ86V59 439 aaPredicted RBP20.81■□□□□ 0.92
NME3-201ENST00000219302 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
NME3-201ENST00000219302 ADAMTSL1Q8N6G6 1762 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 CAPN15O75808 1086 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 JDP2Q8WYK2 163 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 RPGRQ92834 1020 aaKnown RBP20.8■□□□□ 0.92
NME3-201ENST00000219302 CLEC11AQ9Y240 323 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 COL4A5P29400 1685 aa20.8■□□□□ 0.92
NME3-201ENST00000219302 GRIPAP1Q4V328 841 aa20.79■□□□□ 0.92
NME3-201ENST00000219302 SLC51AQ86UW1 340 aa20.79■□□□□ 0.92
NME3-201ENST00000219302 CNTROBQ8N137 903 aa20.79■□□□□ 0.92
NME3-201ENST00000219302 VEGFBP49765 207 aa20.78■□□□□ 0.92
NME3-201ENST00000219302 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
NME3-201ENST00000219302 MAP1SQ66K74 1059 aaPredicted RBP20.78■□□□□ 0.92
NME3-201ENST00000219302 RBM17Q96I25 401 aaKnown RBP20.78■□□□□ 0.92
NME3-201ENST00000219302 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
NME3-201ENST00000219302 FOXN1O15353 648 aa20.77■□□□□ 0.92
NME3-201ENST00000219302 PARP10Q53GL7 1025 aa20.77■□□□□ 0.92
NME3-201ENST00000219302 PPP1R42Q7Z4L9 355 aa20.77■□□□□ 0.92
NME3-201ENST00000219302 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.92
NME3-201ENST00000219302 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
NME3-201ENST00000219302 RIPK4P57078 832 aa20.76■□□□□ 0.91
NME3-201ENST00000219302 BABAM1Q9NWV8 329 aa20.76■□□□□ 0.91
NME3-201ENST00000219302 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
NME3-201ENST00000219302 EIF2S2P20042 333 aaKnown RBP20.75■□□□□ 0.91
NME3-201ENST00000219302 SCNN1DP51172 638 aa20.75■□□□□ 0.91
NME3-201ENST00000219302 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
NME3-201ENST00000219302 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
NME3-201ENST00000219302 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
NME3-201ENST00000219302 GJA3Q9Y6H8 435 aa20.75■□□□□ 0.91
NME3-201ENST00000219302 RASSF10A6NK89 507 aa20.74■□□□□ 0.91
NME3-201ENST00000219302 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
NME3-201ENST00000219302 EPS15P42566 896 aa20.74■□□□□ 0.91
NME3-201ENST00000219302 UTP14AQ9BVJ6 771 aaKnown RBP20.74■□□□□ 0.91
NME3-201ENST00000219302 ANXA1P04083 346 aa20.73■□□□□ 0.91
NME3-201ENST00000219302 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
NME3-201ENST00000219302 WBP1LQ9NX94 342 aa20.73■□□□□ 0.91
NME3-201ENST00000219302 ATP6V0A2Q9Y487 856 aa20.73■□□□□ 0.91
NME3-201ENST00000219302 TMPOP42166 694 aaKnown RBP20.72■□□□□ 0.91
NME3-201ENST00000219302 DEFB115Q30KQ5 88 aa20.72■□□□□ 0.91
NME3-201ENST00000219302 VPS33BQ9H267 617 aa20.72■□□□□ 0.91
NME3-201ENST00000219302 LTBP1Q14766 1721 aa20.72■□□□□ 0.91
NME3-201ENST00000219302 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
NME3-201ENST00000219302 LMOD1P29536 600 aaPredicted RBP20.7■□□□□ 0.9
NME3-201ENST00000219302 RALBP1Q15311 655 aa20.7■□□□□ 0.9
NME3-201ENST00000219302 COPS6Q7L5N1 327 aa20.7■□□□□ 0.9
NME3-201ENST00000219302 RTFDC1Q9BY42 306 aaPredicted RBP20.7■□□□□ 0.9
NME3-201ENST00000219302 PPIP5K2O43314 1243 aa20.69■□□□□ 0.9
NME3-201ENST00000219302 CTCFP49711 727 aaPredicted RBP20.69■□□□□ 0.9
NME3-201ENST00000219302 FMR1Q06787 632 aaKnown RBP eCLIP20.69■□□□□ 0.98e-6■■□□□ 11.8
NME3-201ENST00000219302 USP50Q70EL3 339 aaPredicted RBP20.69■□□□□ 0.9
NME3-201ENST00000219302 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
NME3-201ENST00000219302 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
NME3-201ENST00000219302 ABCC4O15439 1325 aa20.69■□□□□ 0.9
NME3-201ENST00000219302 BBOX1O75936 387 aa20.68■□□□□ 0.9
NME3-201ENST00000219302 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
NME3-201ENST00000219302 AOC3Q16853 763 aa20.68■□□□□ 0.9
NME3-201ENST00000219302 SP8Q8IXZ3 490 aa20.68■□□□□ 0.9
NME3-201ENST00000219302 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
NME3-201ENST00000219302 CHL1O00533 1208 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 CXCL9Q07325 125 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 HSP90AB3PQ58FF7 597 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 NECTIN2Q92692 538 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 TMX4Q9H1E5 349 aaPredicted RBP20.67■□□□□ 0.9
NME3-201ENST00000219302 ZNRF3Q9ULT6 936 aa20.67■□□□□ 0.9
NME3-201ENST00000219302 WDR33Q9C0J8 1336 aaKnown RBP20.67■□□□□ 0.9
NME3-201ENST00000219302 HCLS1P14317 486 aaPredicted RBP20.66■□□□□ 0.9
NME3-201ENST00000219302 AIMP1Q12904 312 aaKnown RBP20.66■□□□□ 0.9
NME3-201ENST00000219302 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
NME3-201ENST00000219302 CST9Q5W186 159 aa20.66■□□□□ 0.9
NME3-201ENST00000219302 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
NME3-201ENST00000219302 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
NME3-201ENST00000219302 LBX1P52954 281 aa20.65■□□□□ 0.9
NME3-201ENST00000219302 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
NME3-201ENST00000219302 TRAF5O00463 557 aa20.64■□□□□ 0.89
NME3-201ENST00000219302 MPNDQ8N594 471 aa20.64■□□□□ 0.89
NME3-201ENST00000219302 ADARB2Q9NS39 739 aaKnown RBP20.64■□□□□ 0.89
NME3-201ENST00000219302 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
NME3-201ENST00000219302 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.89
NME3-201ENST00000219302 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
NME3-201ENST00000219302 MAP2K1Q02750 393 aaPredicted RBP20.63■□□□□ 0.89
NME3-201ENST00000219302 KIAA2012Q0VF49 1180 aa20.63■□□□□ 0.89
NME3-201ENST00000219302 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
NME3-201ENST00000219302 HSPA8P11142 646 aaKnown RBP20.62■□□□□ 0.89
NME3-201ENST00000219302 GRAPQ13588 217 aa20.62■□□□□ 0.89
NME3-201ENST00000219302 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
NME3-201ENST00000219302 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms