RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
UPK3A-201ENST00000216211 LAS1LQ9Y4W2 734 aaKnown RBP19.64■□□□□ 0.73
UPK3A-201ENST00000216211 SNED1Q8TER0 1413 aa19.64■□□□□ 0.73
UPK3A-201ENST00000216211 ZNF541Q9H0D2 1346 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 POTEIP0CG38 1075 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 POTEJP0CG39 1038 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 KRT24Q2M2I5 525 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 PPP1R42Q7Z4L9 355 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 ADAMTS8Q9UP79 889 aa19.63■□□□□ 0.73
UPK3A-201ENST00000216211 CHL1O00533 1208 aa19.62■□□□□ 0.73
UPK3A-201ENST00000216211 IARSP41252 1262 aaKnown RBP19.62■□□□□ 0.73
UPK3A-201ENST00000216211 AIMP1Q12904 312 aaKnown RBP19.62■□□□□ 0.73
UPK3A-201ENST00000216211 PARP10Q53GL7 1025 aa19.62■□□□□ 0.73
UPK3A-201ENST00000216211 PCNTO95613 3336 aa19.61■□□□□ 0.73
UPK3A-201ENST00000216211 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
UPK3A-201ENST00000216211 HOXA10P31260 410 aaPredicted RBP19.61■□□□□ 0.73
UPK3A-201ENST00000216211 C3orf67Q6ZVT6 689 aa19.61■□□□□ 0.73
UPK3A-201ENST00000216211 COPS6Q7L5N1 327 aa19.61■□□□□ 0.73
UPK3A-201ENST00000216211 SLC51AQ86UW1 340 aa19.61■□□□□ 0.73
UPK3A-201ENST00000216211 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
UPK3A-201ENST00000216211 JMYQ8N9B5 988 aa19.6■□□□□ 0.73
UPK3A-201ENST00000216211 XAGE3Q8WTP9 111 aa19.6■□□□□ 0.73
UPK3A-201ENST00000216211 RBM17Q96I25 401 aaKnown RBP19.6■□□□□ 0.73
UPK3A-201ENST00000216211 L3MBTL3Q96JM7 780 aaPredicted RBP19.6■□□□□ 0.73
UPK3A-201ENST00000216211 PSMD1Q99460 953 aa19.6■□□□□ 0.73
UPK3A-201ENST00000216211 COL4A5P29400 1685 aa19.59■□□□□ 0.73
UPK3A-201ENST00000216211 TAF1P21675 1872 aa19.59■□□□□ 0.73
UPK3A-201ENST00000216211 IQCA1LA6NCM1 817 aa19.59■□□□□ 0.73
UPK3A-201ENST00000216211 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
UPK3A-201ENST00000216211 CRAMP1Q96RY5 1269 aa19.59■□□□□ 0.73
UPK3A-201ENST00000216211 UTP14AQ9BVJ6 771 aaKnown RBP19.59■□□□□ 0.73
UPK3A-201ENST00000216211 PRKRIP1Q9H875 184 aaPredicted RBP19.59■□□□□ 0.73
UPK3A-201ENST00000216211 PPEF1O14829 653 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-201ENST00000216211 CC2D2BQ6DHV5 1058 aa19.58■□□□□ 0.72
UPK3A-201ENST00000216211 NLRP3Q96P20 1036 aa19.58■□□□□ 0.72
UPK3A-201ENST00000216211 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-201ENST00000216211 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
UPK3A-201ENST00000216211 ADAMTSL1Q8N6G6 1762 aa19.57■□□□□ 0.72
UPK3A-201ENST00000216211 FZD9O00144 591 aa19.57■□□□□ 0.72
UPK3A-201ENST00000216211 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
UPK3A-201ENST00000216211 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
UPK3A-201ENST00000216211 HSP90AB3PQ58FF7 597 aa19.56■□□□□ 0.72
UPK3A-201ENST00000216211 SLC10A5Q5PT55 438 aa19.56■□□□□ 0.72
UPK3A-201ENST00000216211 JDP2Q8WYK2 163 aa19.56■□□□□ 0.72
UPK3A-201ENST00000216211 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
UPK3A-201ENST00000216211 HDGFL1Q5TGJ6 251 aa19.55■□□□□ 0.72
UPK3A-201ENST00000216211 NLRP10Q86W26 655 aa19.55■□□□□ 0.72
UPK3A-201ENST00000216211 LDHDQ86WU2 507 aa19.55■□□□□ 0.72
UPK3A-201ENST00000216211 HACL1Q9UJ83 578 aa19.55■□□□□ 0.72
UPK3A-201ENST00000216211 ABCC4O15439 1325 aa19.54■□□□□ 0.72
UPK3A-201ENST00000216211 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
UPK3A-201ENST00000216211 TCIRG1Q13488 830 aa19.54■□□□□ 0.72
UPK3A-201ENST00000216211 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
UPK3A-201ENST00000216211 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
UPK3A-201ENST00000216211 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
UPK3A-201ENST00000216211 GRIPAP1Q4V328 841 aa19.53■□□□□ 0.72
UPK3A-201ENST00000216211 GPC2Q8N158 579 aa19.53■□□□□ 0.72
UPK3A-201ENST00000216211 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
UPK3A-201ENST00000216211 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
UPK3A-201ENST00000216211 HOXB7P09629 217 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 EPHX2P34913 555 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 EIF6P56537 245 aaKnown RBP19.52■□□□□ 0.72
UPK3A-201ENST00000216211 LARGE2Q8N3Y3 721 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 CLEC11AQ9Y240 323 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 GJA3Q9Y6H8 435 aa19.52■□□□□ 0.72
UPK3A-201ENST00000216211 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
UPK3A-201ENST00000216211 PLBD2Q8NHP8 589 aa19.51■□□□□ 0.71
UPK3A-201ENST00000216211 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
UPK3A-201ENST00000216211 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
UPK3A-201ENST00000216211 SH3TC1Q8TE82 1336 aa19.51■□□□□ 0.71
UPK3A-201ENST00000216211 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
UPK3A-201ENST00000216211 APAF1O14727 1248 aa19.5■□□□□ 0.71
UPK3A-201ENST00000216211 DBF4Q9UBU7 674 aaPredicted RBP19.5■□□□□ 0.71
UPK3A-201ENST00000216211 MKRN1Q9UHC7 482 aaKnown RBP19.5■□□□□ 0.71
UPK3A-201ENST00000216211 PPIP5K2O43314 1243 aa19.49■□□□□ 0.71
UPK3A-201ENST00000216211 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
UPK3A-201ENST00000216211 AOC3Q16853 763 aa19.49■□□□□ 0.71
UPK3A-201ENST00000216211 ANKRD13DQ6ZTN6 518 aa19.49■□□□□ 0.71
UPK3A-201ENST00000216211 ITGBL1O95965 494 aaPredicted RBP19.48■□□□□ 0.71
UPK3A-201ENST00000216211 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
UPK3A-201ENST00000216211 PNMA8AQ86V59 439 aaPredicted RBP19.48■□□□□ 0.71
UPK3A-201ENST00000216211 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
UPK3A-201ENST00000216211 LRRC37AA6NMS7 1700 aa19.48■□□□□ 0.71
UPK3A-201ENST00000216211 ATP5J2-PTCD1G3V325 749 aa19.47■□□□□ 0.71
UPK3A-201ENST00000216211 BBOX1O75936 387 aa19.47■□□□□ 0.71
UPK3A-201ENST00000216211 HSPA1AP0DMV8 641 aaKnown RBP19.47■□□□□ 0.71
UPK3A-201ENST00000216211 HSPA1BP0DMV9 641 aaKnown RBP19.47■□□□□ 0.71
UPK3A-201ENST00000216211 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
UPK3A-201ENST00000216211 ISCA1Q9BUE6 129 aa19.47■□□□□ 0.71
UPK3A-201ENST00000216211 HYPKQ9NX55 129 aa19.47■□□□□ 0.71
UPK3A-201ENST00000216211 LMOD1P29536 600 aaPredicted RBP19.46■□□□□ 0.71
UPK3A-201ENST00000216211 GRAPQ13588 217 aa19.46■□□□□ 0.71
UPK3A-201ENST00000216211 COL13A1Q5TAT6 717 aaPredicted RBP19.46■□□□□ 0.71
UPK3A-201ENST00000216211 MAP1SQ66K74 1059 aaPredicted RBP19.46■□□□□ 0.71
UPK3A-201ENST00000216211 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
UPK3A-201ENST00000216211 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
UPK3A-201ENST00000216211 FAM89AQ96GI7 184 aa19.46■□□□□ 0.71
UPK3A-201ENST00000216211 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms