RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 FAM13AO94988 1023 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 FAM193AP78312 1265 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CDC37L1Q7L3B6 337 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 ACRBPQ8NEB7 543 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 CCDC155Q8N6L0 562 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.94□□□□□ -1.78
NEB-201ENST00000172853 GJA3Q9Y6H8 435 aa3.94□□□□□ -1.78
NEB-201ENST00000172853 SKIV2LQ15477 1246 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 MIPOL1Q8TD10 442 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 F8W8V4 182 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 PFDN6O15212 129 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 KRT83P78385 493 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CATIPQ7Z7H3 387 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 TSPYL2Q9H2G4 693 aaPredicted RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 TPCN1Q9ULQ1 816 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 KIF15Q9NS87 1388 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 WRNQ14191 1432 aaPredicted RBP eCLIP3.93□□□□□ -1.78
NEB-201ENST00000172853 BAG6P46379 1132 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 RBM26Q5T8P6 1007 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 CLGNO14967 610 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 PABPC4Q13310 644 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-201ENST00000172853 RNF216Q9NWF9 866 aaPredicted RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 A0A1W2PRG0 241 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CALM1P0DP23 149 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CALM2P0DP24 149 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CALM3P0DP25 149 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 VEZTQ9HBM0 779 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 PICK1Q9NRD5 415 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 SRGAP3O43295 1099 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CFAP157Q5JU67 520 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CCDC194A0A1B0GVG4 234 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 IGSF3O75054 1194 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 ALDH3A1P30838 453 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 KHDRBS2Q5VWX1 349 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 STK10O94804 968 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 KRT32Q14532 448 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 TYW5A2RUC4 315 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 NFE2L2Q16236 605 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 MAP9Q49MG5 647 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 EVI5LQ96CN4 794 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 ZNF692Q9BU19 519 aaPredicted RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 KRT10P13645 584 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 NAPBQ9H115 298 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 XPAP23025 273 aaPredicted RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 MPNDQ8N594 471 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 KAT14Q9H8E8 782 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 TCP11L1Q9NUJ3 509 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CCDC40Q4G0X9 1142 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 VPS52Q8N1B4 723 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 SUPT20HQ8NEM7 779 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 PARD3BQ8TEW8 1205 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 GOLGA8CPA6NN73 597 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 ME1P48163 572 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CCDC83Q8IWF9 413 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 NOP9Q86U38 636 aaKnown RBP3.93□□□□□ -1.78
NEB-201ENST00000172853 SMARCC2Q8TAQ2 1214 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 NFKBIAP25963 317 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 CCDC129Q6ZRS4 1044 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 TBC1D31Q96DN5 1066 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 GCNAQ96QF7 691 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 SMARCA4P51532 1647 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 MSL1Q68DK7 614 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 FMNL2Q96PY5 1086 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 USP25Q9UHP3 1055 aa3.93□□□□□ -1.78
NEB-201ENST00000172853 PDE3AQ14432 1141 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 FMNL3Q8IVF7 1028 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 PATL1Q86TB9 770 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 CRACR2AQ9BSW2 395 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SH2D4AQ9H788 454 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 ZEB2O60315 1214 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 HSF2BPO75031 334 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 TCERG1LQ5VWI1 586 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 DPH6Q7L8W6 267 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 HAUS8Q9BT25 410 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 MGEA5O60502 916 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 RBM46Q8TBY0 533 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 NYXQ9GZU5 481 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 ZKSCAN5Q9Y2L8 839 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 GNAI2P04899 355 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 AAMPQ13685 434 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SPAG5Q96R06 1193 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 LMTK3Q96Q04 1460 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 ARHGAP35Q9NRY4 1499 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 IDH1O75874 414 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 ZNF530Q6P9A1 599 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 USP48Q86UV5 1035 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 UBXN4Q92575 508 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 MYD88Q99836 296 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 NUCKS1Q9H1E3 243 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 CCER2I3L3R5 266 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 HDGFL1Q5TGJ6 251 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SWAP70Q9UH65 585 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 MTIF2P46199 727 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 FAM204AQ9H8W3 233 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 NOP56O00567 594 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 SPECC1Q5M775 1068 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SERPINA10Q9UK55 444 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 FAM212AQ96EL1 285 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 EPSTI1Q96J88 318 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 ATP2C2O75185 946 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms