RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Rbm27Q5SFM8 1060 aaKnown RBP17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Ppp6r1Q7TSI3 856 aa17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Dpf1Q9QX66 387 aa17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Tbc1d4Q8BYJ6 1307 aa17.42■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Esco1Q69Z69 843 aa17.41■□□□□ 0.38
Ssr1-204ENSMUST00000225319 RestQ8VIG1 1082 aa17.41■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Plch1Q4KWH5 1682 aa17.41■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Col22a1E9Q7P1 1613 aa17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Rnf123Q5XPI3 1314 aa17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Ppp4r3aQ6P2K6 820 aa17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 SowahdQ8BY98 327 aa17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Tfip11Q9ERA6 838 aaKnown RBP17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Lrp5Q91VN0 1614 aa17.4■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Nlrp1aQ2LKU9 1182 aa17.39■□□□□ 0.38
Ssr1-204ENSMUST00000225319 Hmox1P14901 289 aa17.39■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Smarcc1P97496 1104 aa17.39■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Adam1aQ60813 791 aa17.39■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Ssh1Q76I79 1042 aa17.39■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Sf3a1Q8K4Z5 791 aaKnown RBP17.39■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Bicdl1A0JNT9 577 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Ets1P27577 440 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Lrrc43Q3V0L5 667 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Fam228bQ497Q6 232 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Q8C5K5 320 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Q9D2X8 372 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Foxo4Q9WVH3 505 aa17.38■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Zfyve9A2A8R0 1397 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Sult6b1P0CC03 303 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Slf2Q6P9P0 1278 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Erc2Q6PH08 957 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Ppip5k2Q6ZQB6 1129 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Dmrt2Q8BG36 561 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 GorabQ8BRM2 368 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Ciao1Q99KN2 339 aa17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Nsfl1cQ9CZ44 370 aaKnown RBP17.37■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Gm13023A2A8N2 498 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Mcm4P49717 862 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Snai1Q02085 264 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Atg9aQ68FE2 551 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Slfnl1Q8BHW9 410 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Ttc19Q8CC21 365 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Taf5lQ91WQ5 589 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Mybbp1aQ7TPV4 1344 aaKnown RBP17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 PrkcshO08795 521 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Rfx1P48377 963 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Rtkn2Q14B46 604 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Nol8Q3UHX0 1147 aaKnown RBP17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Unc5clQ6R653 518 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Tmc2Q8R4P4 888 aa17.36■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Cops6O88545 324 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Zbtb38Q3LR78 1197 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Pde3bQ61409 1100 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Fam102bQ8BQS4 339 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 EngaseQ8BX80 734 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Dis3l2Q8CI75 870 aaKnown RBP17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Edc3Q8K2D3 508 aaKnown RBP17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Trim34aQ99PP6 485 aa17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Bag3Q9JLV1 577 aaKnown RBP17.35■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Eya2O08575 532 aa17.34■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Trip6Q9Z1Y4 480 aa17.34■□□□□ 0.37
Ssr1-204ENSMUST00000225319 GalcP54818 684 aa17.33■□□□□ 0.37
Ssr1-204ENSMUST00000225319 NfkbibQ60778 359 aa17.33■□□□□ 0.37
Ssr1-204ENSMUST00000225319 GptQ8QZR5 496 aa17.33■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Slc26a8Q8R0C3 999 aa17.33■□□□□ 0.37
Ssr1-204ENSMUST00000225319 Kdm3aQ6PCM1 1323 aa17.33■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Casq1O09165 405 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Ddit3P35639 168 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Nol10Q5RJG1 687 aaKnown RBP17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Isy1Q69ZQ2 285 aaKnown RBP17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Plcb2A3KGF7 1181 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Npy5rO70342 466 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Hmgb2P30681 210 aaKnown RBP17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Strn4P58404 760 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Ifit1bl2Q3U687 466 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 DbnlQ62418 436 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Dhx38Q80X98 1228 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Ttc14Q9CSP9 761 aa17.32■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Duox1A2AQ92 1551 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Ubr3Q5U430 1889 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Jarid2Q62315 1234 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Susd4Q8BH32 490 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Prune1Q8BIW1 454 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Rhot2Q8JZN7 620 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Plcd4Q8K3R3 807 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 4931408C20RikE9PWP9 1381 aa17.31■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Trim34bJ3QNR8 485 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 AppP12023 770 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Atp1b3P97370 278 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Mctp2Q5RJH2 878 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 4930504O13RikQ8C5Z9 145 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 LratQ9JI60 231 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Cfap44E9Q5M6 1843 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Nphp3Q7TNH6 1325 aa17.3■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Znf692Q3U381 531 aa17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Igflr1Q3U4N7 345 aa17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Fbxo41Q6NS60 873 aa17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 HmcesQ8R1M0 353 aaKnown RBP17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 NgdnQ9DB96 315 aaKnown RBP17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Atp8a2P98200 1148 aa17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Cyp7a1Q64505 503 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 83.7 ms