RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Mybbp1aQ7TPV4 1344 aaKnown RBP11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 NcapgE9PWG6 1004 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 SelenooQ9DBC0 667 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Sel1lQ9Z2G6 790 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Znf335A2A5K6 1337 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Rad50P70388 1312 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ces1hD3Z298 562 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Timm10P62073 90 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 EspnlQ3UYR4 1005 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Adamts13Q769J6 1426 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Dusp9Q7TNL7 452 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ptcd1Q8C2E4 695 aaKnown RBP11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Mmel1Q9JLI3 765 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Nphp3Q7TNH6 1325 aa11.02□□□□□ -0.64
Ldlr-202ENSMUST00000213114 NmiO35309 314 aa11.02□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Hvcn1Q3U2S8 269 aa11.02□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Vps54Q5SPW0 977 aa11.02□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Uggt1Q6P5E4 1551 aa11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Bin1O08539 588 aaKnown RBP11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Disp3A3KFU9 1347 aa11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 NefhP19246 1090 aa11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Utp18Q5SSI6 552 aaKnown RBP11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 MarsQ68FL6 902 aaKnown RBP11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Foxp4Q9DBY0 795 aaKnown RBP11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Kif24Q6NWW5 1356 aa11.02□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tpm4Q6IRU2 248 aa11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tsr2Q8C8T8 191 aa11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Cfap73J3QPZ5 306 aa11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Larp6Q8BN59 492 aa11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Clasp1Q80TV8 1535 aaKnown RBP11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tmem266Q8BZB3 538 aa11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Mrpl44Q9CY73 333 aaKnown RBP11.01□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Slu7Q8BHJ9 585 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ano1Q8BHY3 960 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Plekhg1F6S200 1446 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ets1P27577 440 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Esyt1Q3U7R1 1092 aaKnown RBP11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rapgef3Q8VCC8 918 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Fam213aQ9CYH2 218 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Phkg2Q9DB30 406 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Stxbp4Q9WV89 557 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tlr7P58681 1050 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Anp32eP97822 260 aaKnown RBP11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Fam170aQ66LM6 333 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Gm21985Q6P6P5 1106 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Lmbrd2Q8C561 694 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Iqca1Q9CUL5 857 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ddb1Q3U1J4 1140 aaKnown RBP11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Atg3Q9CPX6 314 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Znf521Q6KAS7 1311 aa11□□□□□ -0.65
Ldlr-202ENSMUST00000213114 FancaQ9JL70 1439 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Pet2A2AHY8 747 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Cavin1O54724 392 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Usp25P57080 1055 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Smarcc1P97496 1104 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Atp2b3Q0VF55 1220 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Lrrfip2Q91WK0 415 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Srgap1Q91Z69 1062 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ccdc39Q9D5Y1 937 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ndufa8Q9DCJ5 172 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Wdr17E9Q271 1322 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Dnajc5P60904 198 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Mctp2Q5RJH2 878 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rad17Q6NXW6 688 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 March6Q6ZQ89 909 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 U2af1l4Q8BGJ9 220 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Pdzd9Q9D9M4 266 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Gcom1E9PZ54 550 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 MyzapQ3UIJ9 466 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Znf653Q6YND2 615 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Nek11Q8C0Q4 628 aa10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Gnl2Q99LH1 728 aaKnown RBP10.99□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Arhgef1Q61210 920 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Mns1Q61884 491 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Nup133Q8R0G9 1155 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rufy3Q9D394 469 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 IkQ9Z1M8 557 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rims1Q99NE5 1463 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 AglF8VPN4 1532 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Fndc1E9Q043 1732 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Atf5O70191 283 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Slc7a3P70423 618 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ppp4r3aQ6P2K6 820 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Fam193aQ8CGI1 1231 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rai14Q9EP71 979 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Eif2ak4Q9QZ05 1648 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Bag1Q60739 355 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ppp1r10Q80W00 888 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Dhx38Q80X98 1228 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tmco3Q8BH01 678 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Lmod1Q8BVA4 595 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ccdc43Q9CR29 222 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Plekho1Q9JIY0 408 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Wdhd1P59328 1117 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Znhit6Q3UFB2 460 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ankrd13dQ6PD24 605 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rbm17Q8JZX4 405 aaKnown RBP10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Wasf1Q8R5H6 559 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Trim11Q99PQ2 467 aa10.98□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Arhgap23Q69ZH9 1483 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms