RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Brwd3A2AHJ4 1799 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ddx60E9PZQ1 1711 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Kiaa0232Q80U59 1396 aaKnown RBP12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 MypnQ5DTJ9 1315 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 NexnQ7TPW1 607 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 AnlnQ8K298 1121 aaKnown RBP12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Flad1Q8R123 492 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Gripap1Q8VD04 806 aa12.57□□□□□ -0.4
Ptpre-208ENSMUST00000211788 NmiO35309 314 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Anapc15P60007 132 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Bms1Q6PGF5 1284 aaKnown RBP12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 ZgpatQ8VDM1 511 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Cdhr2E9Q7P9 1308 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 GpkowQ56A08 488 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Bag4Q8CI61 457 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Gdpd2Q9ESM6 539 aa12.56□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Vwa3bJ9JI28 736 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Dnajc2P54103 621 aaKnown RBP12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 EvcP57680 1005 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Adora1Q60612 326 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Anp32cQ64G17 123 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Nlrp9bQ66X22 1003 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ankle2Q6P1H6 964 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Smim5Q8BT42 78 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ints5Q8CHT3 1018 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Slc26a8Q8R0C3 999 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Rad50P70388 1312 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ccdc173A0JLY1 547 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Rasa1E9PYG6 1038 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ms4a2P20490 235 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Fkbp5Q64378 456 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Soga3Q6NZL0 945 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Filip1lQ6P6L0 1131 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Inpp5bQ8K337 993 aa12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 PtmsQ9D0J8 101 aaKnown RBP12.55□□□□□ -0.4
Ptpre-208ENSMUST00000211788 AceP09470 1312 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Atp2b3Q0VF55 1220 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ica1lQ3TY65 431 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ripor2Q80U16 1078 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 4930504O13RikQ8C5Z9 145 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ccdc38Q8CDN8 563 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Sf3a1Q8K4Z5 791 aaKnown RBP12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Shank2Q80Z38 1476 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Kdm4aQ8BW72 1064 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Il1rapl2Q9ERS6 686 aa12.54□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Syde2E9PUP1 1314 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 InsrrQ9WTL4 1300 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Vsig10D3YX43 558 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ess2O70279 479 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Kcnj4P52189 445 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ncbp1Q3UYV9 790 aaKnown RBP12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Pdzrn3Q69ZS0 1063 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ddx58Q6Q899 926 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Top1mtQ8R4U6 593 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Bag3Q9JLV1 577 aaKnown RBP12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Ppfia1B2RXQ2 1266 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Samd1D3YXK1 519 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 PtmaP26350 111 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Prdm4Q80V63 803 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Slx1bQ8BX32 270 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Slx4ipQ9D7Y9 413 aa12.53□□□□□ -0.4
Ptpre-208ENSMUST00000211788 Cdkn1cP49919 348 aa12.52□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Zdhhc9P59268 364 aa12.52□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Trim52Q8CDV4 233 aa12.52□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Col4a1P02463 1669 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Smarce1O54941 411 aaKnown RBP12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Neurod6P48986 337 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Pde3bQ61409 1100 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Zbtb40Q6PCS8 1258 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Slc20a2Q80UP8 656 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Q8C5K5 320 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 KinQ8K339 391 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Atp6v1dP57746 247 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Utp18Q5SSI6 552 aaKnown RBP12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Kank4Q6P9J5 1016 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Dhx38Q80X98 1228 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Pard3Q99NH2 1333 aa12.51□□□□□ -0.41
Ptpre-208ENSMUST00000211788 AppP12023 770 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Gnat3Q3V3I2 354 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ddx11Q6AXC6 880 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Tmem87bQ8BKU8 555 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Tmx4Q8C0L0 335 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Gjb2Q00977 226 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ifit2Q64112 472 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ints3Q7TPD0 1041 aaKnown RBP12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 LratQ9JI60 231 aa12.5□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Tiam2Q6ZPF3 1715 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 4931400O07RikQ9D4M5 137 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Sh3bp1P55194 680 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 GscQ02591 256 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 MpndQ3TV65 487 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ccnl1Q52KE7 532 aaKnown RBP12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 St18Q80TY4 1045 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ssr1Q9CY50 286 aaKnown RBP12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ccdc7Q9D541 371 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Gm11983V9GXS8 105 aa12.49□□□□□ -0.41
Ptpre-208ENSMUST00000211788 DbnlQ62418 436 aa12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Dis3l2Q8CI75 870 aaKnown RBP12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Nfatc2ipO09130 412 aa12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Cpa2Q504N0 417 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms