RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Nol10Q5RJG1 687 aaKnown RBP13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ncoa5Q91W39 579 aaKnown RBP13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Fam213aQ9CYH2 218 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Gtf3c3Q3TMP1 882 aa13□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 NexnQ7TPW1 607 aa13□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Cpa2Q504N0 417 aa13□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Pof1bQ8K4L4 587 aa13□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Bloc1s4Q8VED2 215 aa13□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Smc4Q8CG47 1286 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Pus3Q9JI38 481 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Prl3d3A0A0M6L0J6 224 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rbbp8nlA2ABX0 614 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ppfia1B2RXQ2 1266 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Mrps27Q8BK72 415 aaKnown RBP12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ubr2Q6WKZ8 1755 aa12.99□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rab3gap1Q80UJ7 981 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Noc3lQ8VI84 807 aaKnown RBP12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Gigyf1Q99MR1 1044 aaKnown RBP12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rad50P70388 1312 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Gjb2Q00977 226 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Pdzrn3Q69ZS0 1063 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Klc3Q91W40 508 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 VeztQ3ZK22 780 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ddx11Q6AXC6 880 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Filip1lQ6P6L0 1131 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Golim4Q8BXA1 655 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Nlrp3Q8R4B8 1033 aa12.98□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ercc3P49135 783 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Erbb4Q61527 1308 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ddx60E9PZQ1 1711 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Tjp1P39447 1745 aaKnown RBP12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ddit3P35639 168 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ifit2Q64112 472 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ginm1Q91WR6 327 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 LlphQ9D945 130 aaKnown RBP12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Cyp19a1P28649 503 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 NpeppsQ11011 920 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Atg9aQ68FE2 551 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rassf8Q8CJ96 419 aa12.97□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rbm8a2A0A0N4SUH6 174 aa12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Dctn1O08788 1281 aa12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Gnl3lQ6PGG6 577 aaKnown RBP12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Mylk2Q8VCR8 613 aa12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rbm8aQ9CWZ3 174 aa12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Rapgef4Q9EQZ6 1011 aa12.96□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 PogkQ80TC5 607 aa12.96□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Cdca7lQ922M5 438 aa12.96□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Rasa1E9PYG6 1038 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ms4a2P20490 235 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Slf2Q6P9P0 1278 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Clca2Q8BG22 942 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Pm20d1Q8C165 503 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Lmbrd2Q8C561 694 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Cyp7a1Q64505 503 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Zkscan1Q8BGS3 561 aaKnown RBP12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 AnlnQ8K298 1121 aaKnown RBP12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Sos2Q02384 1333 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Eya2O08575 532 aa12.95□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Golgb1E9PVZ8 3238 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ugt1a5B2RT14 529 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Cops6O88545 324 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Polr3dQ91WD1 398 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ak2Q9WTP6 239 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Prr5lA2AVJ5 370 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Tmc2Q8R4P4 888 aa12.94□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Shank2Q80Z38 1476 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Prl3d2F6R3P9 224 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Pde4dQ01063 747 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Sh3bp5Q9Z131 463 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Tiam2Q6ZPF3 1715 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Vwa3bJ9JI28 736 aa12.93□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Gpr182P43142 395 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Bag4Q8CI61 457 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Anapc15P60007 132 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ppfia3P60469 1194 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Tti2Q8BGV4 512 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ehd4Q9EQP2 541 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Cyp2c23E9Q5K4 494 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Zdhhc9P59268 364 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 NfkbibQ60778 359 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Zkscan8Q8BSL0 588 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Rbm17Q8JZX4 405 aaKnown RBP12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 IncenpQ9WU62 880 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Trip6Q9Z1Y4 480 aa12.92□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Mcm4P49717 862 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Pde3bQ61409 1100 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ppp4r3aQ6P2K6 820 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ints3Q7TPD0 1041 aaKnown RBP12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 KinQ8K339 391 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Rbm33Q9CXK9 1231 aaKnown RBP12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ftl2P49945 183 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Babam1Q3UI43 333 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Esco1Q69Z69 843 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Rufy3Q9D394 469 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Popdc2Q9ES82 367 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ccne2Q9Z238 404 aa12.91□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Pkp1P97350 728 aaKnown RBP12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ifit1bl2Q3U687 466 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Utp18Q5SSI6 552 aaKnown RBP12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Ptcd1Q8C2E4 695 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 449.6 ms