RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Cadps2Q8BYR5 1297 aa13.46□□□□□ -0.25
Lig1-211ENSMUST00000177588 Sgsm2Q80U12 1005 aa13.46□□□□□ -0.25
Lig1-211ENSMUST00000177588 Cfap157Q0VFX2 523 aa13.46□□□□□ -0.26
Lig1-211ENSMUST00000177588 Fam228bQ497Q6 232 aa13.46□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ccdc66Q6NS45 935 aa13.46□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tnnt2P50752 301 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Fam13bQ8K2H3 851 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Taf5lQ91WQ5 589 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 NaspQ99MD9 773 aaKnown RBP13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tbc1d8Q9Z1A9 1134 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tpm3P21107 285 aaKnown RBP13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 SnrkQ8VDU5 748 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Fam50bQ9WTJ8 334 aa13.45□□□□□ -0.26
Lig1-211ENSMUST00000177588 Cspp1B2RX88 1205 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Pkp1P97350 728 aaKnown RBP13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Rab3gap1Q80UJ7 981 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 ThemisQ8BGW0 636 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Mybbp1aQ7TPV4 1344 aaKnown RBP13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Wdr33Q8K4P0 1330 aaKnown RBP13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Exoc6bA6H5Z3 810 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Eef2kO08796 724 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Kiaa0753Q6A000 959 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ttc27Q8CD92 847 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Mrpl50Q8VDT9 159 aaKnown RBP13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 DccP70211 1447 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Gm973E9Q295 1059 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Esyt1Q3U7R1 1092 aaKnown RBP13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tgfb1i1Q62219 461 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 RgmbQ7TQ33 436 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Gimap5Q8BWF2 308 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Zfp113Q8C689 439 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Plcd3Q8K2J0 785 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Bcl11bQ99PV8 884 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Echdc1Q9D9V3 322 aa13.44□□□□□ -0.26
Lig1-211ENSMUST00000177588 Cfdp1O88271 295 aaKnown RBP13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 CebpzP53569 1052 aaKnown RBP13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Eif4a1P60843 406 aaKnown RBP13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Smim5Q8BT42 78 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nfe2l3Q9WTM4 660 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Abcc4E9Q236 1325 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Atp2b3Q0VF55 1220 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Leo1Q5XJE5 667 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nap1l3Q794H2 544 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Dmrt2Q8BG36 561 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ndufa8Q9DCJ5 172 aa13.43□□□□□ -0.26
Lig1-211ENSMUST00000177588 Map3k13Q1HKZ5 959 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Cnnm3Q32NY4 713 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nxf2Q4ZGD8 691 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Btbd11Q6GQW0 1109 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Simc1E9Q6E9 1354 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Adcy9P51830 1353 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nup153E9Q3G8 1462 aaKnown RBP13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Rbm8a2A0A0N4SUH6 174 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tyro3P55144 880 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Cbx1P83917 185 aaKnown RBP13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tsr2Q8C8T8 191 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 ZgpatQ8VDM1 511 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Rbm8aQ9CWZ3 174 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ddx11Q6AXC6 880 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Sass6Q80UK7 654 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ubxn10Q8BG34 277 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nop14Q8R3N1 860 aaKnown RBP13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ak2Q9WTP6 239 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Aox1O54754 1333 aa13.42□□□□□ -0.26
Lig1-211ENSMUST00000177588 Aox2Q5SGK3 1345 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Atp8b3Q6UQ17 1335 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Oas2E9Q9A9 742 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Trim30aP15533 496 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Pde3bQ61409 1100 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Ccdc155Q80VJ8 648 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Mphosph10Q810V0 681 aaKnown RBP13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Hmx1O70218 332 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Pa2g4P50580 394 aaKnown RBP13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Nkx2-3P97334 362 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Gpatch11Q3UFS4 262 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Arhgef1Q61210 920 aaKnown RBP13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Chmp7Q8R1T1 451 aa13.41□□□□□ -0.26
Lig1-211ENSMUST00000177588 Zpr1Q62384 459 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 CtifQ6PEE2 600 aaKnown RBP13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Sp8Q8BMJ8 486 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Tpd52l1O54818 204 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Zbtb45Q52KG4 520 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Gtf3c5Q8R2T8 520 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Adam1bQ8R534 806 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 CgnP59242 1191 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Bloc1s2Q9CWG9 143 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Pdzd9Q9D9M4 266 aa13.4□□□□□ -0.26
Lig1-211ENSMUST00000177588 Cdkn1cP49919 348 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Lins1Q3U1D0 764 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Ddx54Q8K4L0 874 aaKnown RBP13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Zbtb3Q91X45 518 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Cdhr2E9Q7P9 1308 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Cdk4P30285 303 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Fkbp4P30416 458 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 FanccP50652 591 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Ppp6r1Q7TSI3 856 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Tceanc2Q8R2M0 207 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Bmp2kQ91Z96 1138 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 TnmdQ9EP64 317 aa13.39□□□□□ -0.27
Lig1-211ENSMUST00000177588 Plekhd1B2RPU2 505 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms