RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Pnma3Q8JZW8 466 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Bloc1s4Q8VED2 215 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Cdca7Q9D0M2 382 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ms4a1P19437 291 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fam177a1Q8BR63 207 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Hdac6Q9Z2V5 1149 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 PappaQ8R4K8 1624 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Stk10O55098 966 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Pank2Q3U4S0 443 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Chpf2Q3UU43 768 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Kcna6Q61923 529 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Q8BZJ8 459 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 TatQ8QZR1 454 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Zbtb22Q9Z0G7 638 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Gzf1Q4VBD9 706 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fam83gQ5SWY7 812 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 TkfcQ8VC30 578 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Taf7Q9R1C0 341 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tiam2Q6ZPF3 1715 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Marf1Q8BJ34 1730 aaKnown RBP7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ica1lQ3TY65 431 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ppp1r37Q8BKR5 712 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 GorabQ8BRM2 368 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tmco4Q91WU4 631 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Bcar3Q9QZK2 820 aa7.47□□□□□ -1.21
Lig4-202ENSMUST00000170033 Adcy9P51830 1353 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ppfia1B2RXQ2 1266 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Rasa1E9PYG6 1038 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Usp35M0QWN7 1009 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Nfatc2ipO09130 412 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Kif4P33174 1231 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Prm3Q62100 101 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 4931400O07RikQ9D4M5 137 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Add2Q9QYB8 725 aa7.46□□□□□ -1.21
Lig4-202ENSMUST00000170033 Atp8b3Q6UQ17 1335 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm21663A0A0G2JE01 267 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 5031410I06RikE9Q4E0 267 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm5862K7N5V5 267 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm10220K7N660 267 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Cwc27Q3TKY6 469 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ssfa2Q922B9 1252 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tmem94Q7TSH8 1360 aa7.46□□□□□ -1.22
Lig4-202ENSMUST00000170033 Fyb1O35601 819 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Zfyve19Q9DAZ9 389 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Hmg20bQ9Z104 317 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Sipa1l3G3X9J0 1776 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Aox1O54754 1333 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Zdhhc9P59268 364 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Nol11Q8BJW5 723 aaKnown RBP7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gripap1Q8VD04 806 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Med4Q9CQA5 270 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Wdr93Q402B2 695 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Mctp2Q5RJH2 878 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 OptnQ8K3K8 584 aa7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 PhaxQ9JJT9 385 aaKnown RBP7.45□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm21083A0A0G2JFD5 256 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm21149A0A0G2JFY7 255 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Speer4cG3UXD1 256 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Speer4eK7N6S8 255 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm17019K7N6W5 255 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Mmp14P53690 582 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Aplp1Q03157 653 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 StimateQ3UF25 288 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Cyp2d12Q8BVD2 504 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Zeb2Q9R0G7 1215 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Pmfbp1Q9WVQ0 1022 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Pde3aQ9Z0X4 1141 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Psma5Q9Z2U1 241 aaKnown RBP7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gm45140A0A0N4SUM8 220 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 1700018F24RikB2RW27 314 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Hmox1P14901 289 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tpm3P21107 285 aaKnown RBP7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Pdzrn3Q69ZS0 1063 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ddx11Q6AXC6 880 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Btbd11Q6GQW0 1109 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Zfp251Q6PCX8 632 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Unc5clQ6R653 518 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Arap2Q8BZ05 1703 aa7.44□□□□□ -1.22
Lig4-202ENSMUST00000170033 Mrc1Q61830 1456 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Kcnb2A6H8H5 907 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tagap1P0CAX8 505 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 RubcnlQ3TD16 648 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tmem87bQ8BKU8 555 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ppme1Q8BVQ5 386 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Sf3a1Q8K4Z5 791 aaKnown RBP7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ankrd49Q8VE42 238 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Mrvi1Q9WUX5 899 aaKnown RBP7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tpx2A2APB8 745 aaKnown RBP7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Rnf20Q5DTM8 973 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Irf9Q61179 399 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ush1cQ9ES64 910 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Irx5Q9JKQ4 484 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Myh7Q91Z83 1935 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Cyp2d11P24457 504 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Iqsec3Q3TES0 1195 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ubxn10Q8BG34 277 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Top1mtQ8R4U6 593 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ccar2Q8VDP4 922 aaKnown RBP7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 GckrQ91X44 587 aa7.43□□□□□ -1.22
Lig4-202ENSMUST00000170033 Shank3Q4ACU6 1730 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms