RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Smarcc1P97496 1104 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Kcna6Q61923 529 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Frmd3Q8BHD4 595 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tmem143Q8VD26 458 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Bloc1s2Q9CWG9 143 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 ParvgQ9ERD8 331 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Wdr33Q8K4P0 1330 aaKnown RBP13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Uggt1Q6P5E4 1551 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Bin1O08539 588 aaKnown RBP13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Iqca1Q9CUL5 857 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 SelenooQ9DBC0 667 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Kdm5aQ3UXZ9 1690 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Card10P58660 1021 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ddb1Q3U1J4 1140 aaKnown RBP13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Syt1P46096 421 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 Miga2Q8BK03 593 aa13.16□□□□□ -0.3
Trim9-202ENSMUST00000110522 LyarQ08288 388 aaKnown RBP13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rad50P70388 1312 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Adamts13Q769J6 1426 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Kif24Q6NWW5 1356 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ttc41Q692V3 1318 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Taf3Q5HZG4 932 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Adora1Q60612 326 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Tsr2Q8C8T8 191 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Slc14a2Q8R4T9 930 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Lrrfip2Q91WK0 415 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Sil1Q9EPK6 465 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Ube2hP62257 183 aa13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Rbm17Q8JZX4 405 aaKnown RBP13.15□□□□□ -0.3
Trim9-202ENSMUST00000110522 Myom2Q14BI5 1463 aa13.15□□□□□ -0.31
Trim9-202ENSMUST00000110522 Arhgap23Q69ZH9 1483 aa13.15□□□□□ -0.31
Trim9-202ENSMUST00000110522 Pram1Q6BCL1 675 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm21985Q6P6P5 1106 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Znf704Q9ERQ3 566 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm32742A0A1B0GT42 1604 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Anxa1P10107 346 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rad17Q6NXW6 688 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Znf653Q6YND2 615 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Fam193aQ8CGI1 1231 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 DymQ8CHY3 669 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Dmrtc1Q9D9R7 182 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 PigbQ9JJQ0 542 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 IkQ9Z1M8 557 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Dhx8A2A4P0 1244 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ppp4r3aQ6P2K6 820 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Fam160b2Q80YR2 744 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Prl3d3A0A0M6L0J6 224 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Arid4aF8VPQ2 1261 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Mctp2Q5RJH2 878 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cadps2Q8BYR5 1297 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ccdc43Q9CR29 222 aaKnown RBP13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ccdc39Q9D5Y1 937 aa13.14□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cnot6lQ8VEG6 555 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Mrpl44Q9CY73 333 aaKnown RBP13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 U2af1l4Q8BGJ9 220 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Robo2Q7TPD3 1470 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ncoa4Q5U4H9 625 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Tgfb1i1Q62219 461 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Nek11Q8C0Q4 628 aa13.13□□□□□ -0.31
Trim9-202ENSMUST00000110522 Atf5O70191 283 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cops6O88545 324 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gimap8Q75N62 688 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Igbp1bQ9QZ29 343 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 NhsB1AV60 1647 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Med14A2ABV5 1459 aaKnown RBP13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rims1Q99NE5 1463 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Mybbp1aQ7TPV4 1344 aaKnown RBP13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Stx8O88983 236 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Atg3Q9CPX6 314 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Abca6Q8K441 1624 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Metap2O08663 478 aaKnown RBP13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Hspa2P17156 633 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 NefhP19246 1090 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Pla2g4fQ50L41 855 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 CoilQ5SU73 570 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 4930504O13RikQ8C5Z9 145 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Galntl5Q9D4M9 431 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Nphp3Q7TNH6 1325 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Adcy5P84309 1262 aa13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 MarsQ68FL6 902 aaKnown RBP13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 RarsQ9D0I9 660 aaKnown RBP13.12□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cyp26c1B2RXA7 518 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Casp1P29452 402 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Bend3Q6PAL0 825 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Snx13Q6PHS6 957 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Fbxo2Q80UW2 297 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ano1Q8BHY3 960 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Wasf1Q8R5H6 559 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Sult6b1P0CC03 303 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cdkn1cP49919 348 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 IncenpQ9WU62 880 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Stxbp4Q9WV89 557 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Abca8bQ8K440 1620 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Izumo3A6PWV3 263 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Eya2O08575 532 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Dnm1P39053 867 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Lrrcc1Q69ZB0 1026 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Zkscan8Q8BSL0 588 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Dnajc5gQ8C632 165 aa13.11□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rdm1Q9CQK3 281 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms