RNA–Protein interactions for RNA: ENSMUST00000108363.7

Sptbn4-203, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-203ENSMUST00000108363 Ccdc12Q8R344 166 aaKnown RBP18.38■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Kcnn1Q9EQR3 537 aa18.38■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Ccdc181Q80ZU5 509 aa18.38■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 LarsQ8BMJ2 1178 aa18.38■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Ccdc150Q8CDI7 1110 aa18.38■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Zscan20B2KFW1 1030 aa18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Tmem132eQ6IEE6 982 aa18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gtpbp4Q99ME9 634 aaKnown RBP18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Pafah1b1P63005 410 aaKnown RBP18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Ccdc93Q7TQK5 629 aa18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 U2af1l4Q8BGJ9 220 aa18.37■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Map3k19E9Q3S4 1311 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm21698A0A087WQP8 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm21663A0A0G2JE01 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm7361D3Z6R1 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 5031410I06RikE9Q4E0 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm1979E9QAN3 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm5862K7N5V5 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm10220K7N660 267 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 NmiO35309 314 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Tbc1d7Q9D0K0 293 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm21985Q6P6P5 1106 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Tmem87bQ8BKU8 555 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Tmem132aQ922P8 1018 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Smg7Q5RJH6 1138 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Flad1Q8R123 492 aa18.36■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Kif2cQ922S8 721 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gm10563F6WIE4 79 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Ccdc73Q8CDM4 1066 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Gps2Q921N8 327 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Mtx1P47802 317 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Irf5P56477 497 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Wasf1Q8R5H6 559 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Speer4bQ9D9F7 267 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Baiap2l1Q9DBJ3 514 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Kiaa1551Q5DTW7 1521 aa18.35■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Plcd1Q8R3B1 756 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Lmbr1lQ9D1E5 489 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Lmbr1Q9JIT0 490 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Slc13a4Q8BZ82 625 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Vps53Q8CCB4 832 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Fam50bQ9WTJ8 334 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Zkscan5Q9Z1D8 819 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Snap23O09044 210 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Kdm5aQ3UXZ9 1690 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Larp6Q8BN59 492 aa18.34■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Stim1P70302 685 aa18.33■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Plcd3Q8K2J0 785 aa18.33■□□□□ 0.53
Sptbn4-203ENSMUST00000108363 Pip4k2aO70172 405 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Sdc2P43407 202 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Wdr24Q8CFJ9 790 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Fam208aQ69ZR9 1610 aaKnown RBP18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Grm8P47743 908 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Sh3bp1P55194 680 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Jarid2Q62315 1234 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Pnpla2Q8BJ56 486 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Stk36Q69ZM6 1316 aa18.33■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Rbm33Q9CXK9 1231 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Leo1Q5XJE5 667 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Brd3Q8K2F0 726 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Cyp26c1B2RXA7 518 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Dapk3O54784 448 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Eya1P97767 591 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Bcl11bQ99PV8 884 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Asxl2Q8BZ32 1370 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Tulp4Q9JIL5 1547 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Trap1aP19473 224 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 L1td1Q587J6 782 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Klhl30Q8C3F7 581 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Rbm42Q91V81 474 aaKnown RBP18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 DonsonQ9QXP4 560 aa18.32■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 EspnlQ3UYR4 1005 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Pde1cQ64338 706 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Amotl2Q8K371 772 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Elf2Q9JHC9 593 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Trim28Q62318 834 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Naip7Q9JIB3 1402 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Prrc2bQ7TPM1 1486 aaKnown RBP18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Znf568E9PYI1 671 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Clec11aO88200 328 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ercc3P49135 783 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Sptlc2P97363 560 aaKnown RBP18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ehmt1Q5DW34 1296 aa18.31■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ces1hD3Z298 562 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Rps6kb1Q8BSK8 525 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Bicc1Q99MQ1 977 aaKnown RBP18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ccdc43Q9CR29 222 aaKnown RBP18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Tnni2P13412 182 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ccdc82Q6PG04 518 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Kcnh5Q920E3 988 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Gnat3Q3V3I2 354 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ankrd40Q5SUE8 363 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ccdc96Q9CR92 584 aa18.3■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Sycp1Q62209 993 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 4930548H24RikQ9D496 437 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Frmpd2A0A140LI67 1392 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Gm21680A0A0G2JGR8 267 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Ccdc121E9Q6D3 323 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 Dnm1P39053 867 aa18.29■□□□□ 0.52
Sptbn4-203ENSMUST00000108363 FanccP50652 591 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms