RNA–Protein interactions for RNA: ENSMUST00000072008.10

Sh3rf2-201, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf2, Length 5,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-201ENSMUST00000072008 Tbc1d7Q9D0K0 293 aa11.86□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Usp54Q8BL06 1588 aaKnown RBP11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Igf2bp2Q5SF07 592 aaKnown RBP11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Cdca8Q8BHX3 289 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Gas2l3Q3UWW6 683 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Gm21985Q6P6P5 1106 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Kif21bQ9QXL1 1668 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Sde2Q8K1J5 448 aaKnown RBP11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Krt23Q99PS0 422 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Tbc1d8bA3KGB4 1114 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 FanclQ9CR14 375 aa11.85□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Terf2O35144 541 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Ier5O89113 308 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Nkx1-2P42580 305 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Slc13a4Q8BZ82 625 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 RtcbQ99LF4 505 aaKnown RBP11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Myo1bP46735 1107 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 MthfsQ9D110 203 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Slc1a4O35874 532 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 DlatQ8BMF4 642 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Tex14Q7M6U3 1450 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Sh3tc1G3X9F6 1346 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Gm10093D3YYI8 482 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Hdac1O09106 482 aaKnown RBP11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 NppbP40753 121 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Snrpa1P57784 255 aaKnown RBP11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Jdp2P97875 163 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Nek11Q8C0Q4 628 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Phkg2Q9DB30 406 aa11.84□□□□□ -0.51
Sh3rf2-201ENSMUST00000072008 Xrcc4Q924T3 326 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Hdac9Q99N13 588 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 WtapQ9ER69 396 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Calm1P0DP26 149 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Calm2P0DP27 149 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Calm3P0DP28 149 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Abcf1Q6P542 837 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Txndc16Q7TN22 820 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Zbtb43Q9DAI4 467 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Syce3B5KM66 88 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ube2hP62257 183 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Glg1Q61543 1175 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Tmc2Q8R4P4 888 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Bicc1Q99MQ1 977 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Rbm8a2A0A0N4SUH6 174 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 A0A0U1RNP2 1173 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Dennd3A2RT67 1274 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Pafah1b1P63005 410 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cpa2Q504N0 417 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Lamb3Q61087 1168 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Rbm8aQ9CWZ3 174 aa11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Knop1Q9Z2Q2 478 aaKnown RBP11.83□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Dctn1O08788 1281 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ncoa4Q5U4H9 625 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Tacc1Q6Y685 774 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 SympkQ80X82 1284 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Pde3aQ9Z0X4 1141 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Pdia3P27773 505 aaKnown RBP11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cep170Q6A065 1588 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Pet2A2AHY8 747 aa11.82□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 KdrP35918 1367 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Palm3A2TJV2 734 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Prim1P20664 417 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Srgap1Q91Z69 1062 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cct2P80314 535 aaKnown RBP11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ncf1Q09014 390 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Scaf11E9PZM7 1456 aaKnown RBP11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Lamc1P02468 1607 aaKnown RBP11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Prl3d2F6R3P9 224 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Stx1aO35526 288 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Trim28Q62318 834 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ppp1r10Q80W00 888 aaKnown RBP11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cnot6lQ8VEG6 555 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Rims1Q99NE5 1463 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cnksr1A2A9K7 700 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Slc4a4O88343 1079 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Lrrfip2Q91WK0 415 aa11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Nol7Q9D7Z3 254 aaKnown RBP11.81□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Nsd3Q6P2L6 1439 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Arid4aF8VPQ2 1261 aaKnown RBP11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Mcm4P49717 862 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Idi1P58044 227 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Zbtb3Q91X45 518 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Prl3d3A0A0M6L0J6 224 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Nucb1Q02819 459 aaKnown RBP11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Kmt5bQ3U8K7 883 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Tbc1d5Q80XQ2 815 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Gnl2Q99LH1 728 aaKnown RBP11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Epb41l3Q9WV92 929 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ktn1Q61595 1327 aaKnown RBP11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Atp8b3Q6UQ17 1335 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Esco1Q69Z69 843 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Ccdc66Q6NS45 935 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Hook3Q8BUK6 718 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cetn1P41209 172 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Cetn2Q9R1K9 172 aa11.8□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Pnmal2G3X9N3 661 aa11.79□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Gm12185Q5NCB2 835 aa11.79□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 GlmnQ8BZM1 596 aa11.79□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 Luzp1Q8R4U7 1068 aaKnown RBP11.79□□□□□ -0.52
Sh3rf2-201ENSMUST00000072008 A0A1W2P7S8 802 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms