RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Arid4aF8VPQ2 1261 aaKnown RBP13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Larp1Q6ZQ58 1072 aaKnown RBP13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Sgsm2Q80U12 1005 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 ItpripQ3TNL8 555 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tmem67Q8BR76 992 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Golim4Q8BXA1 655 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Echdc1Q9D9V3 322 aa13.2□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Gng11P61953 73 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Znhit6Q3UFB2 460 aaKnown RBP13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lrrc8aQ80WG5 810 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Bicc1Q99MQ1 977 aaKnown RBP13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Rbbp8nlA2ABX0 614 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Nol10Q5RJG1 687 aaKnown RBP13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ccdc82Q6PG04 518 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tmc2Q8R4P4 888 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Me1P06801 572 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ms4a2P20490 235 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tpm4Q6IRU2 248 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ccz1Q8C1Y8 480 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 NpatQ8BMA5 1420 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Fyb1O35601 819 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Rufy2Q8R4C2 606 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tbc1d7Q9D0K0 293 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Osbpl5Q9ER64 874 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Talpid3E9PV87 1520 aa13.19□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Actn3O88990 900 aaKnown RBP13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Vps54Q5SPW0 977 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Zfp113Q8C689 439 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Fam193aQ8CGI1 1231 aaKnown RBP13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Odf2lQ9D478 642 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Inpp5bQ8K337 993 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Kcnk13Q8R1P5 405 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Atp2b1G5E829 1220 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lonp2Q9DBN5 852 aa13.18□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lins1Q3U1D0 764 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Rps6kb1Q8BSK8 525 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Mtmr3Q8K296 1196 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Lrrfip2Q91WK0 415 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Mrpl44Q9CY73 333 aaKnown RBP13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tubgcp6G5E8P0 1769 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Stk36Q69ZM6 1316 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ttll12Q3UDE2 639 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Rhot2Q8JZN7 620 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Tubb6Q922F4 447 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Adgrl3Q80TS3 1537 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Mybbp1aQ7TPV4 1344 aaKnown RBP13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Cplx2P84086 134 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Znf532Q6NXK2 1036 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Zswim4Q8C7B8 1101 aa13.17□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Mkrn3Q60764 544 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Fez2Q6TYB5 348 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 LyarQ08288 388 aaKnown RBP13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ttc27Q8CD92 847 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Xpo4Q9ESJ0 1151 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Zeb2Q9R0G7 1215 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Efcab6Q6P1E8 1516 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Jakmip2D3YXK0 820 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Hoxb7P09024 217 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ppp1r10Q80W00 888 aaKnown RBP13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 SelenooQ9DBC0 667 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Cep152A2AUM9 1736 aaKnown RBP13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 NmiO35309 314 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Q8BZJ8 459 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Rims1Q99NE5 1463 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Arhgef1Q61210 920 aaKnown RBP13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Fam170aQ66LM6 333 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Ddx58Q6Q899 926 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 U2af1l4Q8BGJ9 220 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Zmynd15Q8C0R7 736 aa13.16□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Grm8P47743 908 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Znf653Q6YND2 615 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Uhrf1bp1B2KF50 1429 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Abcc1O35379 1528 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Gm3409A0A0G2JE67 319 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Clec11aO88200 328 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Csrnp1P59054 583 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Psmb7P70195 277 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Irf9Q61179 399 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Slc39a6Q8C145 765 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Itsn2Q9Z0R6 1659 aa13.15□□□□□ -0.3
Topbp1-201ENSMUST00000035164 Cyp2d12Q8BVD2 504 aa13.15□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ddx41Q91VN6 622 aaKnown RBP13.15□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Atp8b3Q6UQ17 1335 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Znf518aB2RRF6 1478 aaKnown RBP13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Dhx38Q80X98 1228 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gli2Q0VGT2 1544 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 A0A1L1SQF0 893 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ankrd40Q5SUE8 363 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Soga3Q6NZL0 945 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Zranb3Q6NZP1 1069 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Fam76aQ922G2 307 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 MicalclQ9D5U9 680 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Btn2a2A4QPC6 514 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Usp28Q5I043 1051 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Secisbp2lQ6A098 1086 aaKnown RBP13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Dnaaf2Q8BPI1 814 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Taf5lQ91WQ5 589 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gm10563F6WIE4 79 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Cep120Q7TSG1 988 aa13.14□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Rsph4aQ8BYM7 716 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms