RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Ginm1Q91WR6 327 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Atp10bB1AWN4 1474 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Limch1Q3UH68 1057 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Vwa3bJ9JI28 736 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tlr7P58681 1050 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cplx1P63040 134 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Exoc5Q3TPX4 708 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Unc5clQ6R653 518 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Pms1Q8K119 917 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Taf5lQ91WQ5 589 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 ZwintQ9CQU5 252 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mlh1Q9JK91 760 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 AceP09470 1312 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Wdr33Q8K4P0 1330 aaKnown RBP10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Msh6P54276 1358 aaKnown RBP10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tpd52l1O54818 204 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Nlrp1aQ2LKU9 1182 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Kiaa0753Q6A000 959 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ccdc178Q8CDV0 866 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Pde3aQ9Z0X4 1141 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Me1P06801 572 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cdkl5Q3UTQ8 938 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Fsd1Q7TPM6 496 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Fam160b2Q80YR2 744 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cdc45Q9Z1X9 566 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mdc1Q5PSV9 1707 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Calcoco2A2A6M5 331 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ccnl1Q52KE7 532 aaKnown RBP10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Pdlim2Q8R1G6 349 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Flt4P35917 1363 aa10.01□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Stat1P42225 749 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Hook1Q8BIL5 728 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Phf23Q8BSN5 401 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Golim4Q8BXA1 655 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Krt84Q99M73 603 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Zbtb40Q6PCS8 1258 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 EngaseQ8BX80 734 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Bcl11bQ99PV8 884 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ccdc7Q9D541 371 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Med1Q925J9 1575 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cfap58B2RW38 873 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Sult6b1P0CC03 303 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Olfml1Q8BSH2 233 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Chd2E9PZM4 1827 aaKnown RBP10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 A0A1L1SQF0 893 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Gm12185Q5NCB2 835 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Gimap5Q8BWF2 308 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Gdpd2Q9ESM6 539 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tgfb1i1Q62219 461 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Prune1Q8BIW1 454 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Q8BT18 775 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Trim52Q8CDV4 233 aa10□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ppp1r10Q80W00 888 aaKnown RBP9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rufy3Q9D394 469 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 TnmdQ9EP64 317 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Txnrd1Q9JMH6 613 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Eya2O08575 532 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mdm2P23804 489 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rnf123Q5XPI3 1314 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 InsrrQ9WTL4 1300 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Sf3b2Q3UJB0 878 aaKnown RBP9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Spty2d1Q68FG3 682 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 RgmbQ7TQ33 436 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Samm50Q8BGH2 469 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Fsd2Q8BZ52 692 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mon2Q80TL7 1715 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Atp8b3Q6UQ17 1335 aa9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 MsnP26041 577 aaKnown RBP9.99□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Slc39a6Q8C145 765 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rec8Q8C5S7 591 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ccdc158Q8CDI6 1109 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Nip7Q9CXK8 180 aaKnown RBP9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Syde2E9PUP1 1314 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Aox1O54754 1333 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ddx46Q569Z5 1032 aaKnown RBP9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Agtpbp1Q641K1 1218 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Nop14Q8R3N1 860 aaKnown RBP9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rcan3Q9JKK0 239 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mapk8ip1Q9WVI9 707 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Adcy9P51830 1353 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Pdcl2Q78Y63 240 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tmem67Q8BR76 992 aa9.98□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 NmiO35309 314 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tpm2P58774 284 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Plekho1Q9JIY0 408 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 N4bp2F8VQG7 1678 aaKnown RBP9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Gm21985Q6P6P5 1106 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Sgsm2Q80U12 1005 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rps6kb1Q8BSK8 525 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ipo4Q8VI75 1082 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rrp9Q91WM3 475 aaKnown RBP9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Washc4Q3UMB9 1173 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Wdr93Q402B2 695 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Srgap1Q91Z69 1062 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Gtf2a1Q99PM3 378 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Col15a1O35206 1367 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Adora1Q60612 326 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Stk38Q91VJ4 465 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mrpl44Q9CY73 333 aaKnown RBP9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 NgdnQ9DB96 315 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms