RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Kank1E9Q238 1360 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 PaskQ8CEE6 1383 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Speer4dL7N216 212 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Jakmip3Q5DTN8 844 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Sdccag8Q80UF4 717 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Lman1Q9D0F3 517 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Mx2Q9WVP9 655 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ccdc85cE9Q6B2 420 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Scaf1Q5U4C3 1256 aaKnown RBP9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Map3k19E9Q3S4 1311 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Izumo3A6PWV3 263 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Tax1bp1Q3UKC1 814 aaKnown RBP9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Zfp853A0A1D5RM95 733 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Hook2Q7TMK6 716 aa9.51□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Epb41l2O70318 988 aaKnown RBP9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Podxl2Q8CAE9 603 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Efcab2Q9CQ46 164 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Hsf2bpQ9D4G2 338 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ppp1r9bQ6R891 817 aaKnown RBP9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Tmem87bQ8BKU8 555 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ppip5k2Q6ZQB6 1129 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ccdc150Q8CDI7 1110 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 VeztQ3ZK22 780 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Rad17Q6NXW6 688 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Cog6Q8R3I3 657 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ankrd1Q9CR42 319 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Svs3aF2Z472 265 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Mroh2aD3Z750 1679 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Palm3A2TJV2 734 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ccdc129Q14B48 1034 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Map4k4P97820 1233 aaKnown RBP9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Gbp8Q2V6D6 525 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Gimap8Q75N62 688 aa9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 RtcbQ99LF4 505 aaKnown RBP9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Riok3Q9DBU3 519 aaKnown RBP9.5□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ampd3O08739 766 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Skap1Q3UUV5 355 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 IbspQ61711 324 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Sept11Q8C1B7 431 aaKnown RBP9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 NhsB1AV60 1647 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Hoxc9P09633 260 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Stk11ipQ3TAA7 1072 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ppp1r21Q3TDD9 780 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Tmem87aQ8BXN9 555 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 4921504E06RikQ8CET2 560 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Gm18336A0A140LIU8 765 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Akap2O54931 893 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ift57Q8BXG3 429 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Sept6Q9R1T4 434 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 AglF8VPN4 1532 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ddx19aQ61655 478 aaKnown RBP9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Tmem67Q8BR76 992 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Zcrb1Q9CZ96 217 aaKnown RBP9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ppfibp2O35711 882 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Trim25Q61510 634 aaKnown RBP9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Slc14a2Q8R4T9 930 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Krt7Q9DCV7 457 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Lrrc43Q3V0L5 667 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Nlgn1Q99K10 843 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Plekhg2Q6KAU7 1340 aa9.49□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Dact3Q0PHV7 610 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Gas2l3Q3UWW6 683 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Zc3h12cQ5DTV4 884 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Gigyf2Q6Y7W8 1291 aaKnown RBP9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Kdm5cP41230 1554 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Eif3j1Q3UGC7 261 aaKnown RBP9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Eif3j2Q66JS6 263 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ankle2Q6P1H6 964 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Znf131Q8K3J5 619 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Smco2Q9DA21 347 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Kdm6bQ5NCY0 1641 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Dzip1lQ499E4 774 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Eif4a2P10630 407 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Nyap1Q6PFX7 833 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Hdac9Q99N13 588 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Znf335A2A5K6 1337 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Cyp7a1Q64505 503 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Mcm10Q0VBD2 885 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Snx25Q3ZT31 840 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Krt23Q99PS0 422 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Phf14Q9D4H9 881 aa9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Bag3Q9JLV1 577 aaKnown RBP9.48□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ncf1Q09014 390 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Plekho1Q9JIY0 408 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Ccdc170D3YXL0 722 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Sik1Q60670 779 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Zfp444Q3TDV8 331 aaKnown RBP9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Tmem266Q8BZB3 538 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 AdnpQ9Z103 1108 aaKnown RBP9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Myom2Q14BI5 1463 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 NsmfQ99NF2 532 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 BbxQ8VBW5 907 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Krt79Q8VED5 531 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Nphp4P59240 1425 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Brinp3Q499E0 766 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Cnga2Q62398 664 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Skor1Q8BX46 964 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 RarsQ9D0I9 660 aaKnown RBP9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Myd88P22366 296 aa9.47□□□□□ -0.89
Ssr1-201ENSMUST00000021864 Caprin2Q05A80 1031 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms