RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Taf5lQ91WQ5 589 aa13.52□□□□□ -0.24
Herc4-201ENSMUST00000020258 Trpm1Q2TV84 1622 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 Abl1P00520 1123 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 Nrbp1Q99J45 535 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 Znf326O88291 580 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 Gys2Q8VCB3 704 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 Stk38Q91VJ4 465 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 RereQ80TZ9 1558 aa13.52□□□□□ -0.25
Herc4-201ENSMUST00000020258 A0A0U1RNP2 1173 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Gas2l3Q3UWW6 683 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Rbm17Q8JZX4 405 aaKnown RBP13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Chrna2Q91X60 512 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Kcnh5Q920E3 988 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Eif3aP23116 1344 aaKnown RBP13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 VeztQ3ZK22 780 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Atf3Q60765 181 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 DpydQ8CHR6 1025 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Wdr33Q8K4P0 1330 aaKnown RBP13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Cnksr1A2A9K7 700 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Stat1P42225 749 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Anp32cQ64G17 123 aa13.51□□□□□ -0.25
Herc4-201ENSMUST00000020258 Mknk2Q8CDB0 459 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Igbp1bQ9QZ29 343 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Ptgs1P22437 602 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Noc3lQ8VI84 807 aaKnown RBP13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Stard3nlQ9DCI3 235 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Topbp1Q6ZQF0 1515 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Tecpr2Q3UH45 1423 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Kif3aP28741 701 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Smc4Q8CG47 1286 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 OptnQ8K3K8 584 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 PtpruB1AUH1 1446 aa13.5□□□□□ -0.25
Herc4-201ENSMUST00000020258 Prl7a2O54831 253 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 GphnQ8BUV3 769 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Nfe2l3Q9WTM4 660 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Nphp3Q7TNH6 1325 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Cfap99A0A140LIX9 648 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Anxa1P10107 346 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Slc5a1Q8C3K6 665 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Rbm42Q91V81 474 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Taf7Q9R1C0 341 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Brpf3B2KF05 1204 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Ms4a2P20490 235 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Nkx2-3P97334 362 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Gtf2f1Q3THK3 508 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Fam228bQ497Q6 232 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Kank4Q6P9J5 1016 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Rec8Q8C5S7 591 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 GptQ8QZR5 496 aa13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Nop14Q8R3N1 860 aaKnown RBP13.49□□□□□ -0.25
Herc4-201ENSMUST00000020258 Hmgn5Q9JL35 406 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Parp14Q2EMV9 1817 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Cfap58B2RW38 873 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Me1P06801 572 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Pdcl2Q78Y63 240 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Sgsm2Q80U12 1005 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Pdzd9Q9D9M4 266 aa13.48□□□□□ -0.25
Herc4-201ENSMUST00000020258 Qser1A2BIE1 1698 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 FanccP50652 591 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 ThemisQ8BGW0 636 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Syt10Q9R0N4 523 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Cdc42bpgQ80UW5 1551 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Igfbp6P47880 238 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Sass6Q80UK7 654 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Smg7Q5RJH6 1138 aaKnown RBP13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 AidaQ8C4Q6 305 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Dis3l2Q8CI75 870 aaKnown RBP13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Ubxn4Q8VCH8 506 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Sil1Q9EPK6 465 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Abca14E9Q8F8 1683 aa13.47□□□□□ -0.25
Herc4-201ENSMUST00000020258 Cdkn1cP49919 348 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Leo1Q5XJE5 667 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Rps6kb1Q8BSK8 525 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Rhot2Q8JZN7 620 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Myd88P22366 296 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Kcnq3Q8K3F6 873 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 Farp2Q91VS8 1065 aa13.46□□□□□ -0.25
Herc4-201ENSMUST00000020258 NpeppsQ11011 920 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 Limch1Q3UH68 1057 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 DbnlQ62418 436 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 Rab3gap1Q80UJ7 981 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 Pnma3Q8JZW8 466 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 Efcab2Q9CQ46 164 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 Tbc1d8Q9Z1A9 1134 aa13.46□□□□□ -0.26
Herc4-201ENSMUST00000020258 E4f1Q8CCE9 783 aa13.45□□□□□ -0.26
Herc4-201ENSMUST00000020258 Lrrc2Q8VDB8 371 aa13.45□□□□□ -0.26
Herc4-201ENSMUST00000020258 Arid5bQ8BM75 1188 aaKnown RBP13.45□□□□□ -0.26
Herc4-201ENSMUST00000020258 Lmod1Q8BVA4 595 aa13.45□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ift57Q8BXG3 429 aa13.45□□□□□ -0.26
Herc4-201ENSMUST00000020258 Rufy2Q8R4C2 606 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Erc1Q99MI1 1120 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Spata31d1bE9QA57 1361 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 CrcpO35427 148 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 U2af2P26369 475 aaKnown RBP13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Nxf2Q4ZGD8 691 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Taf3Q5HZG4 932 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Prpf4bQ61136 1007 aaKnown RBP13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Ccdc82Q6PG04 518 aa13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Tex2Q6ZPJ0 1128 aaKnown RBP13.44□□□□□ -0.26
Herc4-201ENSMUST00000020258 Srgap1Q91Z69 1062 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms