RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 ScaperF8VQ70 1398 aaKnown RBP14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cdhr2E9Q7P9 1308 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Mctp1E9PV86 951 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ces1aE9PYP1 563 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Pnmal2G3X9N3 661 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Slc4a4O88343 1079 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tpm1P58771 284 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cep131Q62036 1060 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Atp6v1aP50516 617 aaKnown RBP14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cers3Q1A3B0 383 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Vps37dQ810I0 261 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ercc6l2Q9JIM3 1537 aa14.13□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Prl3d3A0A0M6L0J6 224 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Dok7Q18PE0 504 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tpm4Q6IRU2 248 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ankrd23Q812A3 306 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 DymQ8CHY3 669 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cdc45Q9Z1X9 566 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ppp6r1Q7TSI3 856 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Odf2A3KGV1 830 aaKnown RBP14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tpm2P58774 284 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Eme2Q56A04 373 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tubb6Q922F4 447 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Dph6Q9CQ28 267 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 ZwintQ9CQU5 252 aa14.12□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cdkl5Q3UTQ8 938 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Kiaa0754Q69ZZ9 979 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ccdc66Q6NS45 935 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ubxn4Q8VCH8 506 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Mapkapk5O54992 473 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 LifrP42703 1092 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Iqca1Q9CUL5 857 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tpx2A2APB8 745 aaKnown RBP14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Kif3aP28741 701 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ttc12Q8BW49 704 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Atf7Q8R0S1 413 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cnot6lQ8VEG6 555 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 MthfsQ9D110 203 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Plch2A2AP18 1501 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Mmp8O70138 465 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Trim30aP15533 496 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Snrpa1P57784 255 aaKnown RBP14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Tlr7P58681 1050 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Zbtb1Q91VL9 713 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 TnmdQ9EP64 317 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cyp2ab1S4R196 498 aa14.11□□□□□ -0.15
Ctr9-201ENSMUST00000005749 AnkarA2RT91 1465 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 MsnP26041 577 aaKnown RBP14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cdcp1Q5U462 833 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Eya2O08575 532 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Egfem1Q8C088 590 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Fam193aQ8CGI1 1231 aaKnown RBP14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ppp4r3bQ922R5 820 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Igf2bp2Q5SF07 592 aaKnown RBP14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 RestQ8VIG1 1082 aa14.1□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ncf1Q09014 390 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Ift74Q8BKE9 600 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Pik3ap1Q9EQ32 811 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 A0A1L1SQF0 893 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Cnksr1A2A9K7 700 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Kif2cQ922S8 721 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 TnksQ6PFX9 1320 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Anapc15-psA0A140T8L6 141 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Sult6b1P0CC03 303 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Lonrf3Q9D4H7 753 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Kif21bQ9QXL1 1668 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Pard3Q99NH2 1333 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Kif14L0N7N1 1674 aaKnown RBP14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Usp5P56399 858 aaKnown RBP14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Brinp3Q499E0 766 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Liat1Q810M6 228 aa14.09□□□□□ -0.15
Ctr9-201ENSMUST00000005749 Mcm3P25206 812 aaKnown RBP14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Eif5P59325 429 aaKnown RBP14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 EspnlQ3UYR4 1005 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Znf653Q6YND2 615 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 HmcesQ8R1M0 353 aaKnown RBP14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ppp4r3aQ6P2K6 820 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Rnf41Q8BH75 317 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 4930504O13RikQ8C5Z9 145 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Rnf17Q99MV7 1640 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Slc1a4O35874 532 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Atp1b3P97370 278 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Nup88Q8CEC0 753 aaKnown RBP14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Zcrb1Q9CZ96 217 aaKnown RBP14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Sh3tc1G3X9F6 1346 aa14.08□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Disp3A3KFU9 1347 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Atg4a-psA0A0G2JFS9 396 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Mctp2Q5RJH2 878 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Atg4aQ8C9S8 396 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ipo7Q9EPL8 1038 aaKnown RBP14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 AceP09470 1312 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Kdm3aQ6PCM1 1323 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Plekhg1F6S200 1446 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Syce3B5KM66 88 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Prune1Q8BIW1 454 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Triml1Q8BVP1 470 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Zbtb43Q9DAI4 467 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Kdm6aO70546 1401 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Tex14Q7M6U3 1450 aa14.07□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Dennd3A2RT67 1274 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms