RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 A0A0U1RNP2 1173 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 NmiO35309 314 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Nucb2P81117 420 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Agtpbp1Q641K1 1218 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Zscan22Q8BGS5 496 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Ift57Q8BXG3 429 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 4930572O03RikQ8C5Y0 211 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Kiaa1210E9Q0C6 1637 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Mybbp1aQ7TPV4 1344 aaKnown RBP11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Pkp1P97350 728 aaKnown RBP11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Gsdma2Q32M21 443 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 CoilQ5SU73 570 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Prpf4bQ61136 1007 aaKnown RBP11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Wdr24Q8CFJ9 790 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Sirt1Q923E4 737 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Chd1P40201 1711 aa11.1□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Slc5a1Q8C3K6 665 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Lrrfip2Q91WK0 415 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Timm10P62073 90 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Gnat3Q3V3I2 354 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 PzpQ61838 1495 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Tmem87bQ8BKU8 555 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Syt10Q9R0N4 523 aa11.09□□□□□ -0.63
Col6a1-201ENSMUST00000001147 Synj2Q9D2G5 1434 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Washc4Q3UMB9 1173 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Chrna2Q91X60 512 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cnpy2Q9QXT0 182 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Tbc1d8Q9Z1A9 1134 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Hspa2P17156 633 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Eif3bQ8JZQ9 803 aaKnown RBP11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Myd88P22366 296 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ifit1Q64282 463 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Larp6Q8BN59 492 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mrpl44Q9CY73 333 aaKnown RBP11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Hmg20bQ9Z104 317 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Nrxn1Q9CS84 1514 aa11.08□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ugt1a5B2RT14 529 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Gm21969J3QJZ1 289 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cfap157Q0VFX2 523 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ddx58Q6Q899 926 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Adora1Q60612 326 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Fam170aQ66LM6 333 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Me3Q8BMF3 604 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Rps6kb1Q8BSK8 525 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Rbm28Q8CGC6 750 aaKnown RBP11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Taf5lQ91WQ5 589 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ptgs1P22437 602 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 FanccP50652 591 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Sgsm2Q80U12 1005 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Evc2Q8K1G2 1220 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Grpel1Q99LP6 217 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Acsbg1Q99PU5 721 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cdc45Q9Z1X9 566 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Zhx1P70121 873 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Leo1Q5XJE5 667 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ppp1r10Q80W00 888 aaKnown RBP11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cep55Q8BT07 462 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ptcd1Q8C2E4 695 aaKnown RBP11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 OptnQ8K3K8 584 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Bcl11bQ99PV8 884 aa11.07□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Dip2cE9PWR4 1557 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ahdc1Q6PAL7 1594 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Podxl2Q8CAE9 603 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Luzp1Q8R4U7 1068 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Farp2Q91VS8 1065 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Atg3Q9CPX6 314 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Pdcd11Q6NS46 1862 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cd22P35329 862 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mrpl50Q8VDT9 159 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 PtprmP28828 1452 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Erbb4Q61527 1308 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Eif5P59325 429 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 LyarQ08288 388 aaKnown RBP11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Gm21985Q6P6P5 1106 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Kank4Q6P9J5 1016 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 ThemisQ8BGW0 636 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Otud6bQ8K2H2 294 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ripk4Q9ERK0 786 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Znf335A2A5K6 1337 aa11.06□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mroh1E0CZ22 1640 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Abca9Q8K449 1623 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ankle2Q6P1H6 964 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 U2af1l4Q8BGJ9 220 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Nek11Q8C0Q4 628 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Rbm17Q8JZX4 405 aaKnown RBP11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mrps25Q9D125 171 aaKnown RBP11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Igsf1Q7TQA1 1317 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ccdc112A0AUP1 442 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 NefhP19246 1090 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 GptQ8QZR5 496 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Stx1aO35526 288 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Gnl3lQ6PGG6 577 aaKnown RBP11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mtmr3Q8K296 1196 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Gnl2Q99LH1 728 aaKnown RBP11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Efcab2Q9CQ46 164 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Stxbp4Q9WV89 557 aa11.05□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Atp1a3Q6PIC6 1013 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Znf771Q8BJ90 317 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ccdc7Q9D541 371 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cdk5rap2Q8K389 1822 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms