RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ALPPL2P10696 532 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 LIFP15018 202 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 NR1D1P20393 614 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 AHCYP23526 432 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 DGKAP23743 735 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ADORA2BP29275 332 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 GTF2H1P32780 548 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 DUTP33316 252 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 SFTPDP35247 375 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CETN2P41208 172 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CSKP41240 450 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CD86P42081 329 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 OR3A3P47888 321 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CRIP2P52943 208 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PLK1P53350 603 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ATXN3P54252 364 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 DVL1P1P54792 670 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CDH11P55287 796 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 YWHAGP61981 247 aaKnown RBP eCLIP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 IL9RQ01113 521 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ADIGQ0VDE8 80 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 BST2Q10589 180 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 OVGP1Q12889 678 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ILF3Q12906 894 aaKnown RBP eCLIP2.19□□□□□ -2.061e-9■■□□□ 11.4
SMARCB1-208ENST00000634926 ABRQ12979 859 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 DNAJC3Q13217 504 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TSTA3Q13630 321 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 GAMTQ14353 236 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ELAVL3Q14576 367 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 OPCMLQ14982 345 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 HERC3Q15034 1050 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CST6Q15828 149 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 GPR33Q49SQ1 333 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 C14orf177Q52M58 125 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 XKR6Q5GH73 641 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TOR1AIP1Q5JTV8 583 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PIP5KL1Q5T9C9 394 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF776Q68DI1 518 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 NEK5Q6P3R8 708 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 LCLAT1Q6UWP7 414 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 GCNT7Q6ZNI0 430 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 FOXL2NBQ6ZUU3 175 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 MARK2Q7KZI7 788 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 BNIPLQ7Z465 357 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CPEB2Q7Z5Q1 589 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PRUNE1Q86TP1 453 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 NFE4Q86UQ8 179 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TAC4Q86UU9 113 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CACUL1Q86Y37 369 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TMEM126BQ8IUX1 230 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CROCCP3Q8IVE0 287 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 RCOR2Q8IZ40 523 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ARHGAP18Q8N392 663 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PRSS35Q8N3Z0 413 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC25A45Q8N413 288 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 DNAJC22Q8N4W6 341 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 OR52K2Q8NGK3 314 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 OR4C6Q8NH72 309 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 KIAA1524Q8TCG1 905 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 NDRG1Q92597 394 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PRCCQ92733 491 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC35C1Q96A29 364 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ST6GAL2Q96JF0 529 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ALKBH7Q9BT30 221 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 C1QTNF4Q9BXJ3 329 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ULBP1Q9BZM6 244 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 BLZF1Q9H2G9 400 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TFB2MQ9H5Q4 396 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ZDHHC6Q9H6R6 413 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 RAB9BQ9NP90 201 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 NINJ2Q9NZG7 142 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 FLRT3Q9NZU0 649 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CYTH4Q9UIA0 394 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 XPO7Q9UIA9 1087 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 MAN1B1Q9UKM7 699 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TSPAN16Q9UKR8 245 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 HS3ST2Q9Y278 367 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 STRAPQ9Y3F4 350 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 HIVEP3Q5T1R4 2406 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 RP1L1Q8IWN7 2480 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CUBNO60494 3623 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SETD2Q9BYW2 2564 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZFC3H1O60293 1989 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TDRD6O60522 2096 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 IGLV3-10A0A075B6K4 115 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TRBV5-5A0A0J9YX44 114 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CXorf51AA0A1B0GTR3 108 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 A0A1B0GU03 582 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 C2orf92A0A1B0GVN3 265 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PLSCR5A0PG75 271 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 K7ENP7 123 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CCL24O00175 119 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TLR4O00206 839 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CASC3O15234 703 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC22A2O15244 555 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ALOX15BO15296 676 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ACSL4O60488 711 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GLRA3O75311 464 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZMPSTE24O75844 475 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 KRT33AO76009 404 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms