RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ZNF614Q8N883 585 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 SNIP1Q8TAD8 396 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 DUS3LQ96G46 650 aaKnown RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 CDCP1Q9H5V8 836 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ATP13A2Q9NQ11 1180 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 KCNE5Q9UJ90 142 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 ZNF443Q9Y2A4 671 aaPredicted RBP16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
PTCHD3-202ENST00000622555 HS6ST1O60243 411 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 TPST1O60507 370 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 ITGA10O75578 1167 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 PPM1BO75688 479 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 UGT2B17O75795 530 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 UTS2O95399 124 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 KCNJ5P48544 419 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 PNLIPRP2P54317 469 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 ATP12AP54707 1039 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 MAPK14Q16539 360 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 IFI44LQ53G44 452 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 PDZK1Q5T2W1 519 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 SIRT6Q8N6T7 355 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 CLEC1AQ8NC01 280 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 GPR32P1Q8NGA4 272 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 PROX1Q92786 737 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 RASL10BQ96S79 203 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 PINK1Q9BXM7 581 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 RSPO3Q9BXY4 272 aaPredicted RBP16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 MAGIXQ9H6Y5 334 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 ZBTB20Q9HC78 741 aaPredicted RBP16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 APC2O95996 2303 aa16.4■□□□□ 0.22
PTCHD3-202ENST00000622555 ARGFXA6NJG6 315 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 MAN1A2O60476 641 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 FESP07332 822 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 THBS1P07996 1170 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 RAP2AP10114 183 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CYP4B1P13584 511 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 TNFRSF1BP20333 461 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ITGA3P26006 1051 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 LCN1P31025 176 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 PRKAR1BP31321 381 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 RNF144AP50876 292 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 MLF1P58340 268 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 KCNJ10P78508 379 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF141Q15928 474 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 JMJD6Q6NYC1 403 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF836Q6ZNA1 936 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 SLC15A4Q8N697 577 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 OR4C3Q8NH37 302 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CCNL2Q96S94 520 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 DPH1Q9BZG8 443 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 HOXD1Q9GZZ0 328 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CCDC86Q9H6F5 360 aaKnown RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 UBQLN4Q9NRR5 601 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 FLRT3Q9NZU0 649 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 SLC13A4Q9UKG4 626 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 YARS2Q9Y2Z4 477 aaKnown RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 NPIPB9F8W1W9 429 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 PEX1O43933 1283 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ABCB7O75027 752 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ICOSLGO75144 302 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 UGT2B11O75310 529 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 MT-ND1P03886 318 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CAPNS1P04632 268 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 HPGDP15428 266 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 RRADP55042 308 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CDC20Q12834 499 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 DESI1Q6ICB0 168 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 H3F3CQ6NXT2 135 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 DHRS4L2Q6PKH6 230 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 TMEM102Q8N9M5 508 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF527Q8NB42 609 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 OR5M3Q8NGP4 307 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 GEMIN6Q8WXD5 167 aaKnown RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF354BQ96LW1 612 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF184Q99676 751 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 CHID1Q9BWS9 393 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ARMC1Q9NVT9 282 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 C6orf203Q9P0P8 240 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 SH3GLB1Q9Y371 365 aa16.39■□□□□ 0.21
PTCHD3-202ENST00000622555 ACACAQ13085 2346 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 CLDN24A6NM45 220 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 SEMG1P04279 462 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 NID1P14543 1247 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 NAGAP17050 411 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 SOX3P41225 446 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 OR1E2P47887 323 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 SSR4P51571 173 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 FBXW4P57775 412 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 EFR3AQ14156 821 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 CRTC2Q53ET0 693 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 B3GNTL1Q67FW5 361 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 LYPD8Q6UX82 237 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms