RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CADM1Q9BY67 442 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 RTN4RQ9BZR6 473 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 RNF32Q9H0A6 362 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 GALNT9Q9HCQ5 603 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ZNF71Q9NQZ8 489 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 KLHL1Q9NR64 748 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 CD300AQ9UGN4 299 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 MRTO4Q9UKD2 239 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 PRPF19Q9UMS4 504 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 ANGPT4Q9Y264 503 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 AP3M1Q9Y2T2 418 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 SMG1Q96Q15 3661 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 NCKAP5O14513 1909 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 A0A0G2JPF8 293 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 C2orf72A6NCS6 295 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ERICH4A6NGS2 130 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CLDN24A6NM45 220 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HNRNPCL2B2RXH8 293 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HNRNPCL3B7ZW38 293 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ADAM10O14672 748 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TP53I11O14683 189 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 SCO2O43819 266 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 FADS1O60427 444 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 DNAJA2O60884 412 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 UGT2B17O75795 530 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 DNAJC8O75937 253 aaPredicted RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 OPN1SWP03999 348 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 SP1P08047 785 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HNRNPCL4P0DMR1 293 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HSD17B1P14061 328 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TBXA2RP21731 343 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 EVI2BP34910 448 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PGM1P36871 562 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PTGDSP41222 190 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CASP3P42574 277 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TNFSF10P50591 281 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 RASSF2P50749 326 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CRYBA2P53672 197 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PCBP3P57721 371 aaKnown RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 GPR85P60893 370 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 RHDQ02161 417 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PLAURQ03405 335 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 GNA13Q14344 377 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 NDUFAF6Q330K2 333 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 LRRC23Q53EV4 343 aaPredicted RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 PDZK1Q5T2W1 519 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ERICH5Q6P6B1 374 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 IGFL3Q6UXB1 125 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 APOOLQ6UXV4 268 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ASB18Q6ZVZ8 466 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ASRGL1Q7L266 308 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 MARCH3Q86UD3 253 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 VRK2Q86Y07 508 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HPS6Q86YV9 775 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ULK2Q8IYT8 1036 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 DND1Q8IYX4 353 aaKnown RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 ZNF619Q8N2I2 560 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 METTL25Q8N6Q8 603 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 GATSQ8NAP1 163 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 GOLM1Q8NBJ4 401 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PSD4Q8NDX1 1056 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HIPK4Q8NE63 616 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 SPPL2AQ8TCT8 520 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PAQR8Q8TEZ7 354 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 RNF138Q8WVD3 245 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TM9SF4Q92544 642 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 FIG4Q92562 907 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 HAS2Q92819 552 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 MCUR1Q96AQ8 359 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CCDC124Q96CT7 223 aaKnown RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 TMCO6Q96DC7 493 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ARSGQ96EG1 525 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 OSBPL11Q9BXB4 747 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 RSPO3Q9BXY4 272 aaPredicted RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 MFRPQ9BY79 579 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.04□□□□□ -1.281e-8■■■■□ 21.4
MSH6-211ENST00000606499 PCDHAC1Q9H158 963 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 METTL7AQ9H8H3 244 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TRIM45Q9H8W5 580 aaPredicted RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 PROK2Q9HC23 129 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 SH2D2AQ9NP31 389 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 UBQLN4Q9NRR5 601 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 DEPPQ9NTK1 212 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 KLRF1Q9NZS2 232 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CALML5Q9NZT1 146 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 CNOT11Q9UKZ1 510 aaKnown RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 ABCG2Q9UNQ0 655 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 ZNF451Q9Y4E5 1061 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 PCDHGA10Q9Y5H3 936 aa7.04□□□□□ -1.28
MSH6-211ENST00000606499 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
MSH6-211ENST00000606499 CACNA1GO43497 2377 aa7.03□□□□□ -1.28
MSH6-211ENST00000606499 PINLYPA6NC86 204 aa7.03□□□□□ -1.28
MSH6-211ENST00000606499 AGAP5A6NIR3 686 aa7.03□□□□□ -1.28
MSH6-211ENST00000606499 B4DXG7 233 aa7.03□□□□□ -1.28
MSH6-211ENST00000606499 CXCR6O00574 342 aa7.03□□□□□ -1.28
MSH6-211ENST00000606499 SCDO00767 359 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms