RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LCN1P31025 176 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ALDH3A2P51648 485 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 CDH12P55289 794 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 NRG3P56975 720 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 RGS8P57771 180 aaPredicted RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 SMIM11AP58511 58 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 NHLH1Q02575 133 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 DAG1Q14118 895 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ZNF141Q15928 474 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ZSWIM7Q19AV6 140 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 RBM45Q8IUH3 476 aaKnown RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 LACC1Q8IV20 430 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ZNF614Q8N883 585 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 OR6T1Q8NGN1 323 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 NUBPLQ8TB37 319 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 OIT3Q8WWZ8 545 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 NR4A3Q92570 626 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 EFHD2Q96C19 240 aaPredicted RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 ZNF597Q96LX8 424 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 RBM4BQ9BQ04 359 aaKnown RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 RBM4Q9BWF3 364 aaKnown RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 FAM117AQ9C073 453 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 NRSN2Q9GZP1 204 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ZNF700Q9H0M5 742 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 POLR1BQ9H9Y6 1135 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.62■□□□□ 0.25
VRK3-225ENST00000601912 RLIMQ9NVW2 624 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 KCNE5Q9UJ90 142 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 CHST2Q9Y4C5 530 aa16.62■□□□□ 0.25
VRK3-225ENST00000601912 TRBV11-1A0A0K0K1C0 115 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 CENPVL1A0A0U1RR11 272 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 STMND1H3BQB6 276 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 PRKNO60260 465 aaPredicted RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 GADD45GO95257 159 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ACADSP16219 412 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 IL12BP29460 328 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 IFNA8P32881 189 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 GABREP78334 506 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 GANABQ14697 944 aaKnown RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 COLEC12Q5KU26 742 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 PDZK1Q5T2W1 519 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 MRPL2Q5T653 305 aaKnown RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 TBPL2Q6SJ96 375 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 TMEM179BQ7Z7N9 219 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ZNF605Q86T29 641 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 SLC34A3Q8N130 599 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ZNF441Q8N8Z8 693 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ZNF527Q8NB42 609 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 PHF10Q8WUB8 498 aaKnown RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 DIO2Q92813 273 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 WFDC6Q9BQY6 131 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 GPR87Q9BY21 358 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 Q9H521 79 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 UBQLN4Q9NRR5 601 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 MAGED1Q9Y5V3 778 aaPredicted RBP16.61■□□□□ 0.25
VRK3-225ENST00000601912 LYVE1Q9Y5Y7 322 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 HS3ST3B1Q9Y662 390 aa16.61■□□□□ 0.25
VRK3-225ENST00000601912 ZNF292O60281 2723 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 IGHV1-45A0A0A0MS14 117 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 CDC14CA4D256 554 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 CDHR4A6H8M9 788 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 CLDN24A6NM45 220 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 C21orf140B9A014 251 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 NPIPB9F8W1W9 429 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 AP3D1O14617 1153 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 REM1O75628 298 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 ZFAND5O76080 213 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 HPRP00739 348 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 HPGDP15428 266 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 RBMS1P29558 406 aaKnown RBP16.6■□□□□ 0.25
VRK3-225ENST00000601912 PLCXD2Q0VAA5 305 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 SSPNQ14714 243 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 PCOLCEQ15113 449 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 EXT1Q16394 746 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 CMIPQ8IY22 773 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 HS3ST5Q8IZT8 346 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 TAGAPQ8N103 731 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 OR52J3Q8NH60 311 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 LMF1Q96S06 567 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 FNDC11Q9BVV2 318 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 ACER3Q9NUN7 267 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 PDP1Q9P0J1 537 aaPredicted RBP16.6■□□□□ 0.25
VRK3-225ENST00000601912 KCND3Q9UK17 655 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 ACAD8Q9UKU7 415 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 RAB26Q9ULW5 256 aa16.6■□□□□ 0.25
VRK3-225ENST00000601912 FAM186AA6NE01 2351 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 SLC30A4O14863 429 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 HS6ST1O60243 411 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 RAD1O60671 282 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 ALPLP05186 524 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 H1F0P07305 194 aaKnown RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 CD82P27701 267 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 STAT5AP42229 794 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 HMGA2P52926 109 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 DNASE1L3Q13609 305 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 BTBD16Q32M84 506 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 RANBP3LQ86VV4 465 aaPredicted RBP16.59■□□□□ 0.25
VRK3-225ENST00000601912 ADAMTS14Q8WXS8 1223 aa16.59■□□□□ 0.25
VRK3-225ENST00000601912 NACC2Q96BF6 587 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms