RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 NID1P14543 1247 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 RRADP55042 308 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 KCNJ10P78508 379 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 SLC34A1Q06495 639 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 CHAF1BQ13112 559 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 CLN3Q13286 438 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 ZNF141Q15928 474 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 SNCBQ16143 134 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 DUSP7Q16829 419 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 RNF220Q5VTB9 566 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 TCTN3Q6NUS6 607 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 ZAR1Q86SH2 424 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 CMIPQ8IY22 773 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 PQLC1Q8N2U9 271 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 ZNF248Q8NDW4 579 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 KCNE4Q8WWG9 221 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 THAP4Q8WY91 577 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 LMF1Q96S06 567 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 ADOQ96SZ5 270 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 LIN28AQ9H9Z2 209 aaKnown RBP14.24□□□□□ -0.13
UPF1-206ENST00000598471 IL1RAPQ9NPH3 570 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 UBQLN4Q9NRR5 601 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 YARS2Q9Y2Z4 477 aaKnown RBP14.24□□□□□ -0.13
UPF1-206ENST00000598471 SH3GLB1Q9Y371 365 aa14.24□□□□□ -0.13
UPF1-206ENST00000598471 TMEM200CA6NKL6 621 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ZNF891A8MT65 544 aaPredicted RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 NPIPB9F8W1W9 429 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 H3BNH8 94 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 TSPAN2O60636 221 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 DEAF1O75398 565 aaPredicted RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 LGI1O95970 557 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 LDLRP01130 860 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 SEMG1P04279 462 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 CAPNS1P04632 268 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 CELA2AP08217 269 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ITGAMP11215 1152 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 CYP4B1P13584 511 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ENDOUP21128 410 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 MAGEA2P43356 314 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 AIMP2Q13155 320 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 DCAF10Q5QP82 559 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 PDZK1Q5T2W1 519 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 OPN5Q6U736 354 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ZNF836Q6ZNA1 936 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 PIWIL3Q7Z3Z3 882 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 HMGN2P46Q86SG4 172 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 CYP4Z1Q86W10 505 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 CARM1Q86X55 608 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 DND1Q8IYX4 353 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 CLEC1AQ8NC01 280 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 GPR32P1Q8NGA4 272 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ZG16BQ96DA0 208 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ZNF347Q96SE7 839 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 ATP13A2Q9NQ11 1180 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 STOML1Q9UBI4 398 aa14.23□□□□□ -0.13
UPF1-206ENST00000598471 FAM32AQ9Y421 112 aaKnown RBP14.23□□□□□ -0.13
UPF1-206ENST00000598471 CACNA1AO00555 2505 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 TMEM229AB2RXF0 380 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 GNGT2O14610 69 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 ITGA10O75578 1167 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 OR2J2O76002 312 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 NADKO95544 446 aaPredicted RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 MT-ND1P03886 318 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 NGFRP08138 427 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 TBXA2RP21731 343 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 CLK3P49761 638 aaKnown RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 SSR4P51571 173 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 SESN3P58005 492 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 EEF1A1P68104 462 aaKnown RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 RPP38P78345 283 aaKnown RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 ATP6AP1Q15904 470 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 MAPK14Q16539 360 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 GRAMD1BQ3KR37 738 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 CRTC2Q53ET0 693 aaPredicted RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 NUP54Q7Z3B4 507 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 ARMC10Q8N2F6 343 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 TMEM102Q8N9M5 508 aaPredicted RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 LRTOMTQ8WZ04 291 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 TMCO6Q96DC7 493 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 THOC3Q96J01 351 aaKnown RBP14.22□□□□□ -0.13
UPF1-206ENST00000598471 RASL10BQ96S79 203 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 PKP2Q99959 881 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 BDH2Q9BUT1 245 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 DPH1Q9BZG8 443 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 CDCP1Q9H5V8 836 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 DNAJB9Q9UBS3 223 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 TEKT2Q9UIF3 430 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 SLC35A3Q9Y2D2 325 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 DTNAQ9Y4J8 743 aa14.22□□□□□ -0.13
UPF1-206ENST00000598471 NCOR2Q9Y618 2525 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 SERINC4A6NH21 518 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 hCG_2039718K7EN88 272 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 TP53I11O14683 189 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 CLOCKO15516 846 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 OXSR1O95747 527 aaPredicted RBP14.21□□□□□ -0.13
UPF1-206ENST00000598471 CST1P01037 141 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 FBXO45P0C2W1 286 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 TNFRSF1BP20333 461 aa14.21□□□□□ -0.13
UPF1-206ENST00000598471 ITGA3P26006 1051 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms