RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 BTBD2Q9BX70 525 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 QRSL1Q9H0R6 528 aaKnown RBP12.26□□□□□ -0.45
VRK3-205ENST00000593919 SLC26A1Q9H2B4 701 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 CALML5Q9NZT1 146 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 AASSQ9UDR5 926 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 PISDQ9UG56 409 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 SATB2Q9UPW6 733 aa12.26□□□□□ -0.45
VRK3-205ENST00000593919 A0A0G2JPF8 293 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 A0A1W2PNU3 283 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 PRAMEF25A6NGN4 478 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 HNRNPCL2B2RXH8 293 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 HNRNPCL3B7ZW38 293 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 H3BMQ9 156 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 DYRK3O43781 588 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 XPNPEP2O43895 674 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SERPINB7O75635 380 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 NKX2-2O95096 273 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ANGPTL1O95841 491 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 DDAH2O95865 285 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 HTR1AP08908 422 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 JMJD7P0C870 316 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 HNRNPCL4P0DMR1 293 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 CD247P20963 164 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 DCKP27707 260 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 FMO3P31513 532 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 GABRA3P34903 492 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SLC37A1P57057 533 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SPIBQ01892 262 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 FOXD4Q12950 439 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNHIT3Q15649 155 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 DCST2Q5T1A1 773 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 XAF1Q6GPH4 301 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 FRRS1Q6ZNA5 592 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 TSEN54Q7Z6J9 526 aaKnown RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 GALNT6Q8NCL4 622 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 C7orf57Q8NEG2 295 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 GPR32P1Q8NGA4 272 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 OR13F1Q8NGS4 319 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SLC2A12Q8TD20 617 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 COG8Q96MW5 612 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 DEPDC7Q96QD5 511 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SDF2Q99470 211 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 TUBA1CQ9BQE3 449 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 MESP1Q9BRJ9 268 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 OR8D2Q9GZM6 311 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 NDUFAF4Q9P032 175 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SH3GLB1Q9Y371 365 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 PCDHGB3Q9Y5G1 929 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 GXYLT2A0PJZ3 443 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNF701M0R085 212 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 TNFRSF11BO00300 401 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 NOL3O60936 208 aaKnown RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 ATE1O95260 518 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 IGKV3-11P04433 115 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 JUNBP17275 347 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 EPHA2P29317 976 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 KEAP1Q14145 624 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 FAHD1Q6P587 224 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 FAM198BQ6UWH4 519 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNF517Q6ZMY9 492 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 OR7G1Q8NGA0 311 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 OR14A16Q8NHC5 309 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNF721Q8TF20 911 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 RASSF5Q8WWW0 418 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 GEMIN6Q8WXD5 167 aaKnown RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 DAZLQ92904 295 aaKnown RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 MR1Q95460 341 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZG16BQ96DA0 208 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ITPAQ9BY32 194 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 CCDC90BQ9GZT6 254 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 ZNF350Q9GZX5 532 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 LHPPQ9H008 270 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 PAK1IP1Q9NWT1 392 aaPredicted RBP12.25□□□□□ -0.45
VRK3-205ENST00000593919 MKLN1Q9UL63 735 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 WDR45Q9Y484 360 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 SNX5Q9Y5X3 404 aa12.25□□□□□ -0.45
VRK3-205ENST00000593919 CCDC187A0A096LP49 1063 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 SYNDIG1LA6NDD5 238 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 PLD2O14939 933 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 ALOX12BO75342 701 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 STK17BO94768 372 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 CT45A8P0DMV1 189 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 CT45A9P0DMV2 189 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 KCNJ5P48544 419 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 POU6F2P78424 691 aaPredicted RBP12.24□□□□□ -0.45
VRK3-205ENST00000593919 NNATQ16517 81 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 CT45A2Q5DJT8 189 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 TYW3Q6IPR3 259 aaKnown RBP12.24□□□□□ -0.45
VRK3-205ENST00000593919 FIGNL1Q6PIW4 674 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 NPSR1Q6W5P4 371 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 ANKRD37Q7Z713 158 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 OR4N2Q8NGD1 307 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 FBLIM1Q8WUP2 373 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 APOBEC4Q8WW27 367 aaKnown RBP12.24□□□□□ -0.45
VRK3-205ENST00000593919 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
VRK3-205ENST00000593919 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms