RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PRR5LQ6MZQ0 368 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 TFAP2EQ6VUC0 442 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 ASRGL1Q7L266 308 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 MOB1BQ7L9L4 216 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 PIWIL3Q7Z3Z3 882 aaKnown RBP2.51□□□□□ -2.01
COPS3-217ENST00000583160 FNDC8Q8TC99 324 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 JPH2Q9BR39 696 aaPredicted RBP2.51□□□□□ -2.01
COPS3-217ENST00000583160 OPN3Q9H1Y3 402 aaPredicted RBP2.51□□□□□ -2.01
COPS3-217ENST00000583160 TSPY26PQ9H489 355 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 KCNMB3Q9NPA1 279 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 SLC2A6Q9UGQ3 507 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 PDE10AQ9Y233 779 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 LAMB1P07942 1786 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 ZNF609O15014 1411 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 CNTNAP1P78357 1384 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 PSME4Q14997 1843 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 IGKV6-21A0A0C4DH24 114 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 EI24O14681 340 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 RANBP6O60518 1105 aaKnown RBP2.5□□□□□ -2.01
COPS3-217ENST00000583160 GMNNO75496 209 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 GHRP10912 638 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 UGT1A6P19224 532 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 FUT3P21217 361 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 IGHV1-2P23083 117 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 ACADSBP45954 432 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 HNRNPA3P51991 378 aaKnown RBP2.5□□□□□ -2.01
COPS3-217ENST00000583160 GEMP55040 296 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 BFSP1Q12934 665 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 SLC39A6Q13433 755 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 STXBP2Q15833 593 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 SGCBQ16585 318 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 SLC10A5Q5PT55 438 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 SPATA46Q5T0L3 261 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 KCTD11Q693B1 232 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 IRGCQ6NXR0 463 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 CDC42EP5Q6NZY7 148 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 SIDT2Q8NBJ9 832 aaKnown RBP2.5□□□□□ -2.01
COPS3-217ENST00000583160 RPGRIP1Q96KN7 1286 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 DDX50Q9BQ39 737 aaKnown RBP2.5□□□□□ -2.01
COPS3-217ENST00000583160 DPH7Q9BTV6 452 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 EHD1Q9H4M9 534 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 RNPEPL1Q9HAU8 725 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 HPS4Q9NQG7 708 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 KLK12Q9UKR0 248 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 RPH3AQ9Y2J0 694 aaPredicted RBP2.5□□□□□ -2.01
COPS3-217ENST00000583160 USP16Q9Y5T5 823 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 LRRC37AA6NMS7 1700 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 LTBP1Q14766 1721 aa2.5□□□□□ -2.01
COPS3-217ENST00000583160 LAMB2P55268 1798 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 CDHR2Q9BYE9 1310 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 A0A0U1RQK1 487 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 RTN2O75298 545 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 NOL4O94818 638 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 HOXB7P09629 217 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 ALOX5P09917 674 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 H2AFZP0C0S5 128 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 METAP1P53582 386 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 HERV-K104P63124 156 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 HERPUD1Q15011 391 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 DCAF4L1Q3SXM0 396 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 CCDC14Q49A88 953 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 EPC2Q52LR7 807 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 SBK1Q52WX2 424 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 ATRAIDQ6UW56 229 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 STHQ8IWL8 128 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 TTC5Q8N0Z6 440 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 PLEKHF1Q96S99 279 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 MAGEF1Q9HAY2 307 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 ZCCHC17Q9NP64 241 aaKnown RBP2.49□□□□□ -2.01
COPS3-217ENST00000583160 VPS54Q9P1Q0 977 aa2.49□□□□□ -2.01
COPS3-217ENST00000583160 LEF1Q9UJU2 399 aaPredicted RBP2.49□□□□□ -2.01
COPS3-217ENST00000583160 COL4A5P29400 1685 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 A0A0A6YYC8 382 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 C11orf98E9PRG8 122 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 I3L1I5 382 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 EEF2KO00418 725 aaKnown RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 CA11O75493 328 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 HMOX1P09601 288 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 UGT1A3P35503 534 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 TNNT2P45379 298 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 SLC26A2P50443 739 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 UCP2P55851 309 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 TEFQ10587 303 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 ORC2Q13416 577 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 GK2Q14410 553 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 EXOSC7Q15024 291 aaKnown RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 TAF7Q15545 349 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 PRR4Q16378 134 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 ZNF528Q3MIS6 628 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 USP50Q70EL3 339 aaPredicted RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 MCOLN2Q8IZK6 566 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 LINC01555Q8NAE3 123 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 OR52J3Q8NH60 311 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 SPATA17Q96L03 361 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 ZMAT2Q96NC0 199 aaKnown RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 TSSK1BQ9BXA7 367 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 NUDCQ9Y266 331 aa2.48□□□□□ -2.01
COPS3-217ENST00000583160 DDX60Q8IY21 1712 aaKnown RBP2.48□□□□□ -2.01
COPS3-217ENST00000583160 MAP3K15Q6ZN16 1313 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms