RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 HOXB13Q92826 284 aaPredicted RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 TRIM8Q9BZR9 551 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 PTGES2Q9H7Z7 377 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 FBXO34Q9NWN3 711 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 GIN1Q9NXP7 522 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 ASIC5Q9NY37 505 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 FAF1Q9UNN5 650 aaPredicted RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 NPIPA5A0A0B4J1W7 369 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NPIPA7E9PJI5 369 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 ZIC3O60481 467 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 HPGDP15428 266 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 LBPP18428 481 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 MSX1P28360 303 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 RNF144AP50876 292 aaPredicted RBP13.87□□□□□ -0.19
RPL28-207ENST00000558815 DGKQP52824 942 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NME5P56597 212 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 SMU1Q2TAY7 513 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NSUN5P2Q63ZY6 315 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 CDC73Q6P1J9 531 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 ZCCHC12Q6PEW1 402 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 ZNF295-AS1Q8N0V1 137 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 CLEC4FQ8N1N0 589 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 OR4C3Q8NH37 302 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 ADAMTS15Q8TE58 950 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 SMPDL3BQ92485 455 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 TLCD1Q96CP7 247 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 SPOCK3Q9BQ16 436 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 ACTRT3Q9BYD9 372 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NEUROD4Q9HD90 331 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 HAO1Q9UJM8 370 aa13.87□□□□□ -0.19
RPL28-207ENST00000558815 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
RPL28-207ENST00000558815 GOLGA8QA0A0J9YX86 632 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 GOLGA8OA6NCC3 632 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 CD8B2A6NJW9 211 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 SHISA8B8ZZ34 492 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 GOLGA8NF8WBI6 632 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 H3BML4 177 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 DVL2O14641 736 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 NDUFB5O43674 189 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 CPSF4O95639 269 aaKnown RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 CPN1P15169 458 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 POU3F2P20265 443 aaPredicted RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 ATP6V1C1P21283 382 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 UQCRC1P31930 480 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 CEACAM8P31997 349 aaPredicted RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 TIMP3P35625 211 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 LHX2P50458 406 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 ZNF136P52737 540 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 HBA1P69905 142 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 C17orf67Q0P5P2 114 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 SNTB1Q13884 538 aaKnown RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 SLC25A35Q3KQZ1 300 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 ATG16L1Q676U5 607 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 ANKRD46Q86W74 232 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 C9orf106Q8NAJ2 232 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 RELL2Q8NC24 303 aaPredicted RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 OR5D16Q8NGK9 328 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 OR4A15Q8NGL6 344 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 SFXN5Q8TD22 340 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 STACQ99469 402 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 BTBD2Q9BX70 525 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 PIGUQ9H490 435 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 WDR55Q9H6Y2 383 aaPredicted RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 MEAF6Q9HAF1 191 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 THAP1Q9NVV9 213 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
RPL28-207ENST00000558815 MRPS18CQ9Y3D5 142 aaKnown RBP13.86□□□□□ -0.19
RPL28-207ENST00000558815 PKDREJQ9NTG1 2253 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 DOCK7Q96N67 2140 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 INTS1Q8N201 2190 aaKnown RBP13.85□□□□□ -0.19
RPL28-207ENST00000558815 RNF103-CHMP3A0A140T963 221 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 C9JVG2 144 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 SCDO00767 359 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 SDHDO14521 159 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 SEC14L5O43304 696 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 KRT16P08779 473 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 TMIGD3P0DMS9 266 aaPredicted RBP13.85□□□□□ -0.19
RPL28-207ENST00000558815 CHMP24386 653 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 SSTR2P30874 369 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 CASP9P55211 416 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 CLDN18P56856 261 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 C21orf58P58505 322 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 B3GALT5-AS1P59052 145 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 TLE4Q04727 773 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 MYBPHQ13203 477 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
RPL28-207ENST00000558815 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPL28-207ENST00000558815 NXNQ6DKJ4 435 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 CHMP1BQ7LBR1 199 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 P4HA3Q7Z4N8 544 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 GRAMD2AQ8IUY3 354 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 ZNF614Q8N883 585 aa13.85□□□□□ -0.19
RPL28-207ENST00000558815 PSMA8Q8TAA3 256 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms