RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LMF1Q96S06 567 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 DENND2DQ9H6A0 471 aaPredicted RBP11.44□□□□□ -0.58
TPM1-209ENST00000558072 DTX4Q9Y2E6 619 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 FRYQ5TBA9 3013 aa11.44□□□□□ -0.58
TPM1-209ENST00000558072 GXYLT2A0PJZ3 443 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 WWP2O00308 870 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 HNRNPRO43390 633 aaKnown RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 TSPAN2O60636 221 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 ZNF682O95780 498 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 FBXO45P0C2W1 286 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 RAP2AP10114 183 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 ITGAMP11215 1152 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 NID1P14543 1247 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 NCK1P16333 377 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 AQP1P29972 269 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 SLC7A1P30825 629 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 MSX2P35548 267 aaPredicted RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 DCTP40126 519 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 RFX3P48380 749 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 KCNJ5P48544 419 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 DMTNQ08495 405 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 FUT5Q11128 374 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 GK3PQ14409 553 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 NTRK2Q16620 822 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 IFI44LQ53G44 452 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 TMEM81Q6P7N7 255 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 WDR53Q7Z5U6 358 aaPredicted RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 CYP4Z1Q86W10 505 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 GALNT16Q8N428 558 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 WDR60Q8WVS4 1066 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 TM9SF4Q92544 642 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 SPACA9Q96E40 222 aaPredicted RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 OTUB1Q96FW1 271 aaPredicted RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 RASL10BQ96S79 203 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 ADOQ96SZ5 270 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 TBL1XR1Q9BZK7 514 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 POLR2J2Q9GZM3 115 aaKnown RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 ING2Q9H160 280 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 POLR2J3Q9H1A7 115 aaKnown RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 CDCP1Q9H5V8 836 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 CPNE5Q9HCH3 593 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 HPF1Q9NWY4 346 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 STMN3Q9NZ72 180 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 CNIH4Q9P003 139 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 MKLN1Q9UL63 735 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 FAM32AQ9Y421 112 aaKnown RBP11.43□□□□□ -0.58
TPM1-209ENST00000558072 DTNAQ9Y4J8 743 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
TPM1-209ENST00000558072 NCOR2Q9Y618 2525 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 PRAMEF27A3QJZ7 478 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ANKRD65E5RJM6 399 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 PRKNO60260 465 aaPredicted RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 FCMRO60667 390 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 OR2J2O76002 312 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 UTS2O95399 124 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ATP6V1B2P21281 511 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 RPS4Y1P22090 263 aaKnown RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 SOX11P35716 441 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 CYB561P49447 251 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 HLCSP50747 726 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 TMPRSS3P57727 454 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 SMIM11AP58511 58 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 KCNJ10P78508 379 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ELF3P78545 371 aaPredicted RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 RIPK1Q13546 671 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 NNATQ16517 81 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 CCNJQ5T5M9 372 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 RTL4Q6ZR62 310 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ZNF550Q7Z398 422 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 GRAMD2AQ8IUY3 354 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 TOR1AIP2Q8NFQ8 470 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 BRIX1Q8TDN6 353 aaKnown RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 THAP3Q8WTV1 239 aaPredicted RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 TPD52L3Q96J77 140 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ZNF347Q96SE7 839 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 RNF32Q9H0A6 362 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 RUBCNLQ9H714 662 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 DCLRE1BQ9H816 532 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ZBTB20Q9HC78 741 aaPredicted RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 ARMC1Q9NVT9 282 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ZNF443Q9Y2A4 671 aaPredicted RBP11.42□□□□□ -0.58
TPM1-209ENST00000558072 AP4S1Q9Y587 144 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 PCDHGB7Q9Y5F8 929 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
TPM1-209ENST00000558072 ANKRD33BA6NCL7 494 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 SERINC4A6NH21 518 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 TMEM200CA6NKL6 621 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 ALG1L2C9J202 215 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 GTPBP1O00178 669 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 EIF4E2O60573 245 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 UGT2B17O75795 530 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 PRKD3O94806 890 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms