RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 CCT7Q99832 543 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 REEP4Q9H6H4 257 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 RNF122Q9H9V4 155 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 EQTNQ9NQ60 294 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 SH3BP4Q9P0V3 963 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 TMED5Q9Y3A6 229 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 ACANP16112 2415 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 IGLV3-32A0A0A0MS00 114 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 NPIPB8E9PQR5 432 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 AZIN1O14977 448 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 CTIFO43310 598 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 NDUFB5O43674 189 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 HSPA4LO95757 839 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 PLGP00747 810 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 KRT4P19013 534 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 CD53P19397 219 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 FPR1P21462 350 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 LCN1P31025 176 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 HOXC12P31275 282 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 UGT2B10P36537 528 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 ASMTP46597 345 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 SERPINB4P48594 390 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 SUCLG1P53597 346 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 CLDN15P56746 228 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 SIRPAP78324 504 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 KIAA0040Q15053 153 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 PON3Q15166 354 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 CLEC6AQ6EIG7 209 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 ZCCHC12Q6PEW1 402 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 SH2D5Q6ZV89 423 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 R3HCC1LQ7Z5L2 792 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 P3H2Q8IVL5 708 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 WDR75Q8IWA0 830 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 OR6Y1Q8NGX8 325 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 FNDC9Q8TBE3 224 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 FIG4Q92562 907 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 SLC9A6Q92581 669 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 MTERF3Q96E29 417 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 EGLN2Q96KS0 407 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 EML4Q9HC35 981 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 ACSS1Q9NUB1 689 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 KLHL28Q9NXS3 571 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 EMC9Q9Y3B6 208 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 CCL27Q9Y4X3 112 aa12.26□□□□□ -0.45
SNRPA1-204ENST00000558020 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 SMIM23A6NLE4 172 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 FAM171A2A8MVW0 826 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 TBX19O60806 448 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 TRIM13O60858 407 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 SOX30O94993 753 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 NKX2-2O95096 273 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 NGFRP08138 427 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 PPP3CBP16298 524 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF17P17021 662 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 TBXA2RP21731 343 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ME2P23368 584 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ADSLP30566 484 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 CTBP2P56545 445 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 CLDN20P56880 219 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 GRAMD1BQ3KR37 738 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 PDSS1Q5T2R2 415 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 LRIG3Q6UXM1 1119 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 RNF165Q6ZSG1 346 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 FAM214BQ7L5A3 538 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 MISPQ8IVT2 679 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 METTL25Q8N6Q8 603 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF610Q8N9Z0 462 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 NUP43Q8NFH3 380 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 OR5M1Q8NGP8 315 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ACTRT2Q8TDY3 377 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 PIK3R3Q92569 461 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 ZBTB8AQ96BR9 441 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 C18orf12Q96KH6 178 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 MS4A4EQ96PG1 132 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 PIP5K1AQ99755 562 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 UBQLN4Q9NRR5 601 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 GLRX2Q9NS18 164 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 FLRT3Q9NZU0 649 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 NTMQ9P121 344 aa12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 MCTS1Q9ULC4 181 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-204ENST00000558020 GXYLT2A0PJZ3 443 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 C17orf51A8MQB3 221 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 TMEM114B3SHH9 223 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 B4DXG7 233 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 ALG1L2C9J202 215 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 H0YC42 278 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 SCDO00767 359 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 EIF1AYO14602 144 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms