RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 SPDYAQ5MJ70 313 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 GALNT18Q6P9A2 607 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 GALNT10Q86SR1 603 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 OR2L13Q8N349 312 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 OR6K3Q8NGY3 331 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 OR10D3Q8NH80 312 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 PIK3R3Q92569 461 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 SLC9A6Q92581 669 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 ELP4Q96EB1 424 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 TBL1XR1Q9BZK7 514 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 Q9N2J8 555 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 DDX18Q9NVP1 670 aaKnown RBP13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 EMC9Q9Y3B6 208 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 FBN3Q75N90 2809 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 USF3Q68DE3 2245 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 IGLV3-32A0A0A0MS00 114 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 HS3ST1O14792 307 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 CRLF1O75462 422 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 FCGR2AP12318 317 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 IMPDH1P20839 514 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 CTBP2P56545 445 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 OCRLQ01968 901 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 C17orf67Q0P5P2 114 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 FAM71E1Q6IPT2 247 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 EXOC3L1Q86VI1 746 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 GATSQ8NAP1 163 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 SPATA3Q8NHX4 192 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 RAB3IL1Q8TBN0 382 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 KLHDC3Q9BQ90 382 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 LMF2Q9BU23 707 aaKnown RBP13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 ACTR6Q9GZN1 396 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 CXorf56Q9H5V9 222 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 SIRT5Q9NXA8 310 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 POLR3HQ9Y535 204 aaPredicted RBP13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 RTTNQ86VV8 2226 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 ROS1P08922 2347 aa13.25□□□□□ -0.29
TMEM106C-216ENST00000551305 UBFD1O14562 309 aaKnown RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 CXCL13O43927 109 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 NTN1O95631 604 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 PPP3CBP16298 524 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 IL11P20809 199 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 PRKAA2P54646 552 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 PRR5P85299 388 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF763Q0D2J5 394 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNHIT3Q15649 155 aaPredicted RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 TSC22D1Q15714 1073 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF611Q8N823 705 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 LILRB1Q8NHL6 650 aaPredicted RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 IFT81Q8WYA0 676 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ADGRG7Q96K78 797 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 AMDHD1Q96NU7 426 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 TMEM204Q9BSN7 226 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 C12orf49Q9H741 205 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 MIEF1Q9NQG6 463 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 MRTO4Q9UKD2 239 aaKnown RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 NFU1Q9UMS0 254 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 ZANQ9Y493 2812 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 TLN2Q9Y4G6 2542 aa13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 FBN1P35555 2871 aaKnown RBP13.24□□□□□ -0.29
TMEM106C-216ENST00000551305 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 TNFSF11O14788 317 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 SOX30O94993 753 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 ATP5F1P24539 256 aaPredicted RBP13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 GCAP28676 217 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 PSMD4P55036 377 aaKnown RBP13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF844Q08AG5 666 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 LCP2Q13094 533 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF551Q7Z340 670 aaPredicted RBP13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 WDR75Q8IWA0 830 aaKnown RBP13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 GSTO2Q9H4Y5 243 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 TMEM185BQ9H7F4 350 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 MID1IP1Q9NPA3 183 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 TAS2R7Q9NYW3 318 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 GRID1Q9ULK0 1009 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 PRR14LQ5THK1 2151 aa13.23□□□□□ -0.29
TMEM106C-216ENST00000551305 A0A0J9YW62 118 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 SERTM1A2A2V5 107 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 GOLGA8RI6L899 631 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 SLITRK5O94991 958 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 SYNGR4O95473 234 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 ECHS1P30084 290 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 NTSP30990 170 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 GSTM5P46439 218 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 PKNOX1P55347 436 aa13.22□□□□□ -0.29
TMEM106C-216ENST00000551305 CLEC12BQ2HXU8 276 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms