RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 RPP38P78345 283 aaKnown RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 LIPEQ05469 1076 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 SCARB2Q14108 478 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 ZNF630Q2M218 657 aaPredicted RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 COLEC12Q5KU26 742 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 C11orf65Q8NCR3 313 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 ZG16BQ96DA0 208 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 UBL7Q96S82 380 aaPredicted RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 TREX2Q9BQ50 279 aaPredicted RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 SAP130Q9H0E3 1048 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 QRSL1Q9H0R6 528 aaKnown RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 PROK2Q9HC23 129 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 POLE3Q9NRF9 147 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 KLRF1Q9NZS2 232 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 TMEM181Q9P2C4 612 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 CENPVL1A0A0U1RR11 272 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 C5orf58C9J3I9 102 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 SCO2O43819 266 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 FADS1O60427 444 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 LCN1P31025 176 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 PTGDSP41222 190 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 DNASE1L1P49184 302 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 RNF144AP50876 292 aaPredicted RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 PLEKHN1Q494U1 663 aaPredicted RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 APOOLQ6UXV4 268 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 ZNF619Q8N2I2 560 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 POGLUT1Q8NBL1 392 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 TMEM178AQ8NBL3 297 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 RNF138Q8WVD3 245 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 REXO5Q96IC2 774 aaKnown RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 SPATA9Q9BWV2 254 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 RTN4RQ9BZR6 473 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 UBQLN4Q9NRR5 601 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 TAS2R1Q9NYW7 299 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 CALML5Q9NZT1 146 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 KCNE5Q9UJ90 142 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 AP3M1Q9Y2T2 418 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 KLF13Q9Y2Y9 288 aaPredicted RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 PCDHGA10Q9Y5H3 936 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 IGSF10Q6WRI0 2623 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 C2orf72A6NCS6 295 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 FAM220BPB1ANY3 271 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 NPIPB9F8W1W9 429 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 GUSBP08236 651 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 TBXA2RP21731 343 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 AQP1P29972 269 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 ATP12AP54707 1039 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 RBBP4Q09028 425 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 GNA13Q14344 377 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 REEP3Q6NUK4 255 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 PTRH1Q86Y79 214 aaKnown RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 SULF2Q8IWU5 870 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 RNF148Q8N7C7 305 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 ZNF614Q8N883 585 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 OR2T12Q8NG77 320 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 SLC7A6OSQ96CW6 309 aaPredicted RBP19.41■□□□□ 0.7
VPS29-206ENST00000549578 CDRT15Q96T59 188 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 DOHHQ9BU89 302 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 OSBPL11Q9BXB4 747 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 TBL1XR1Q9BZK7 514 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 ALG2Q9H553 416 aa19.41■□□□□ 0.7
VPS29-206ENST00000549578 ZFYVE26Q68DK2 2539 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 DSPPQ9NZW4 1301 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PINLYPA6NC86 204 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 C17orf51A8MQB3 221 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 EBAG9O00559 213 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 SCDO00767 359 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 ADAM10O14672 748 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PEX1O43933 1283 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 UGT2B17O75795 530 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PGM3O95394 542 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 NGFRP08138 427 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 HPGDP15428 266 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 CNR1P21554 472 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 GSK3BP49841 420 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 EEFSECP57772 596 aaKnown RBP19.4■□□□□ 0.7
VPS29-206ENST00000549578 KCNJ2P63252 427 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 MAPK14Q16539 360 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 VMACQ2NL98 169 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PDZK1Q5T2W1 519 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 TMEM81Q6P7N7 255 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 MARCH3Q86UD3 253 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 METTL25Q8N6Q8 603 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 TEX19Q8NA77 164 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 GATSQ8NAP1 163 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 HIPK4Q8NE63 616 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PNPLA2Q96AD5 504 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 ANGPTL4Q9BY76 406 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 HOXD1Q9GZZ0 328 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 ABCG2Q9UNQ0 655 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 PCDHGB6Q9Y5F9 930 aa19.4■□□□□ 0.7
VPS29-206ENST00000549578 NINQ8N4C6 2090 aa19.39■□□□□ 0.7
VPS29-206ENST00000549578 A0A0G2JPF8 293 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 ANKRD33BA6NCL7 494 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 PRORSD1PA6NEY8 169 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 HNRNPCL2B2RXH8 293 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 HNRNPCL3B7ZW38 293 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 ATXN7O15265 892 aaPredicted RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 HNRNPCL1O60812 293 aaKnown RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 HNRNPCL4P0DMR1 293 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms