RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 PPIEQ9UNP9 301 aaKnown RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 PCDHGB7Q9Y5F8 929 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 PCDHGB3Q9Y5G1 929 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 A0A0G2JPF8 293 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HNRNPCL2B2RXH8 293 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HNRNPCL3B7ZW38 293 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 TPST1O60507 370 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 PRAMEF2O60811 474 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 CHRM4P08173 479 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 EMDP50402 254 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 SELENOWP63302 87 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 ARG2P78540 354 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF155Q12901 538 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 GPAT3Q53EU6 434 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF468Q5VIY5 522 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 IGFL2Q6UWQ7 119 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HSDL2Q6YN16 418 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 PRICKLE2Q7Z3G6 844 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 C9orf40Q8IXQ3 194 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 SLC5A8Q8N695 610 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 OR10Q1Q8NGQ4 319 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 LZICQ8WZA0 190 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HOXB13Q92826 284 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 CDS1Q92903 461 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF354BQ96LW1 612 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 TREX2Q9BQ50 279 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 LMF2Q9BU23 707 aaKnown RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 DOHHQ9BU89 302 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 FOLH1BQ9HBA9 442 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 DUSP22Q9NRW4 184 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 COPS7AQ9UBW8 275 aa16.03■□□□□ 0.16
HDAC7-227ENST00000548080 HEMK1Q9Y5R4 338 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-227ENST00000548080 TMEM200CA6NKL6 621 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 A8MVJ9 347 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 TMEM229AB2RXF0 380 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 WWP2O00308 870 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 NKX2-2O95096 273 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 OPN1SWP03999 348 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 CLPSP04118 112 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 IGKV3-11P04433 115 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 MLF1P58340 268 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 TRIP10Q15642 601 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 ZNHIT3Q15649 155 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-227ENST00000548080 MEP1AQ16819 746 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 ARHGAP11BQ3KRB8 267 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 PLEKHN1Q494U1 663 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-227ENST00000548080 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 IGFL3Q6UXB1 125 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 FKBP9P1Q75LS8 142 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 VTCN1Q7Z7D3 282 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 AMIGO2Q86SJ2 522 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 KRT73Q86Y46 540 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 ZNF615Q8N8J6 731 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 CHDHQ8NE62 594 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-227ENST00000548080 TM9SF4Q92544 642 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 FBXL20Q96IG2 436 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 TPD52L3Q96J77 140 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 LMF1Q96S06 567 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 OR10A5Q9H207 317 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 RUBCNLQ9H714 662 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 TEKT2Q9UIF3 430 aa16.02■□□□□ 0.15
HDAC7-227ENST00000548080 GPC6Q9Y625 555 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-227ENST00000548080 ZNF462Q96JM2 2506 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 TTC36A6NLP5 189 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 SERPINB7O75635 380 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 ZFAND5O76080 213 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 MFN2O95140 757 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 H6PDO95479 791 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 SEMG1P04279 462 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 ETS2P15036 469 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 GABRA3P34903 492 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 VHLP40337 213 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 RNF4P78317 190 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 ATP6AP1Q15904 470 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 PRR30Q53SZ7 412 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-227ENST00000548080 COX18Q8N8Q8 333 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 Q8NA96 180 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 GPR151Q8TDV0 419 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 ART5Q96L15 291 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 VSTM2LQ96N03 204 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 GAL3ST4Q96RP7 486 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 BTBD2Q9BX70 525 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC7-227ENST00000548080 PRODH2Q9UF12 536 aa16.01■□□□□ 0.15
HDAC7-227ENST00000548080 PYCARD-AS1I3L0S3 204 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 ITGA10O75578 1167 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 OR2J2O76002 312 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 AK1P00568 194 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 LDLRP01130 860 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 MT-ND1P03886 318 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 MAGEA2P43356 314 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 MLLT10P55197 1068 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 SLC37A1P57057 533 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 KCNJ10P78508 379 aa16■□□□□ 0.15
HDAC7-227ENST00000548080 HPCAP84074 193 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms