RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 IL10RAQ13651 578 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF141Q15928 474 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.37
SCARB1-209ENST00000545305 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 LPCAT4Q643R3 524 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 OR2T5Q6IEZ7 315 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 DEF8Q6ZN54 512 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 OR2T29Q8NH02 315 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ELP5Q8TE02 316 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.37
SCARB1-209ENST00000545305 DIO2Q92813 273 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 SDCCAG3Q96C92 435 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ZG16BQ96DA0 208 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 IP6K3Q96PC2 410 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.37
SCARB1-209ENST00000545305 LMF1Q96S06 567 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ARHGDIGQ99819 225 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 REEP1Q9H902 201 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 NDUFAF4Q9P032 175 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 ENPP4Q9Y6X5 453 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 SAC3D1A6NKF1 404 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 M0R3H8 397 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 WWP2O00308 870 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 SCDO00767 359 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 ABCB7O75027 752 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 DNAJB5O75953 348 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 ZNF23P17027 643 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 RHCEP18577 417 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 ABCD3P28288 659 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 PNLIPRP2P54317 469 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 EEF1A1P68104 462 aaKnown RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 SPIBQ01892 262 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 FOXC1Q12948 553 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 EFR3AQ14156 821 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 PUM1Q14671 1186 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 MAPK14Q16539 360 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 NRF1Q16656 503 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 LRRC36Q1X8D7 754 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 KBTBD2Q8IY47 623 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 SVOPLQ8N434 492 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 APOBEC4Q8WW27 367 aaKnown RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 NR4A3Q92570 626 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 ADOQ96SZ5 270 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 PIP5K1AQ99755 562 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 C9orf16Q9BUW7 83 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 AMBRA1Q9C0C7 1298 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 NPFFR2Q9Y5X5 522 aa12.7□□□□□ -0.38
SCARB1-209ENST00000545305 MRPS18BQ9Y676 258 aaKnown RBP12.7□□□□□ -0.38
SCARB1-209ENST00000545305 NPIPB9F8W1W9 429 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 H3BNH8 94 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 AP3D1O14617 1153 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 PEX1O43933 1283 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 TSPAN2O60636 221 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 DPM1O60762 260 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 PPM1BO75688 479 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 DIRAS1O95057 198 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 PRSS23O95084 383 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 CYP4B1P13584 511 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 RRM2P31350 389 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 IFNA8P32881 189 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 ARHGDIAP52565 204 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 ATP1A4Q13733 1029 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 FGFBP1Q14512 234 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-209ENST00000545305 SLC5A8Q8N695 610 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 SLC15A4Q8N697 577 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 OR5K1Q8NHB7 308 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 CIB1Q99828 191 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
SCARB1-209ENST00000545305 C8orf4Q9NR00 106 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
SCARB1-209ENST00000545305 MYOTQ9UBF9 498 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 IL17BQ9UHF5 180 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 SLC35A3Q9Y2D2 325 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
SCARB1-209ENST00000545305 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
SCARB1-209ENST00000545305 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
SCARB1-209ENST00000545305 PRAMEF25A6NGN4 478 aa12.68□□□□□ -0.38
SCARB1-209ENST00000545305 SERINC4A6NH21 518 aa12.68□□□□□ -0.38
SCARB1-209ENST00000545305 OR6C70A6NIJ9 312 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms