RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ANKRD33BA6NCL7 494 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 C17orf51A8MQB3 221 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 AHRRA9YTQ3 701 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 SDHDO14521 159 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 PLOD3O60568 738 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
USB1-203ENST00000539737 KITP10721 976 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 GPX3P22352 226 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 CTSSP25774 331 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 TIMP3P35625 211 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 C21orf58P58505 322 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 PSPHP78330 225 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 EXOSC7Q15024 291 aaKnown RBP13.56□□□□□ -0.24
USB1-203ENST00000539737 VASNQ6EMK4 673 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 NATD1Q8N6N6 113 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 SIMC1Q8NDZ2 872 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 KAT2AQ92830 837 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 LRRC46Q96FV0 321 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 PERPQ96FX8 193 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 COX4I2Q96KJ9 171 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 TUBA1CQ9BQE3 449 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 GLIPR2Q9H4G4 154 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 METTL7AQ9H8H3 244 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 ACSS1Q9NUB1 689 aaPredicted RBP13.56□□□□□ -0.24
USB1-203ENST00000539737 JKAMPQ9P055 326 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
USB1-203ENST00000539737 DTX4Q9Y2E6 619 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
USB1-203ENST00000539737 A0A087WV62 115 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 SH3D21A4FU49 640 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 SNPHO15079 494 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 ATP8B1O43520 1251 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 G6PDP11413 515 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 KRT20P35900 424 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 CPOXP36551 454 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 STARP49675 285 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 PRSS53Q2L4Q9 553 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 CPTPQ5TA50 214 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 ANKRD26P1Q6NSI1 321 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 TMEM107Q6UX40 140 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 WDR75Q8IWA0 830 aaKnown RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 SPPL2AQ8TCT8 520 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 INTS12Q96CB8 462 aaKnown RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 MAGEB18Q96M61 343 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 ITPAQ9BY32 194 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 DDX18Q9NVP1 670 aaKnown RBP13.55□□□□□ -0.24
USB1-203ENST00000539737 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 HEATR5AQ86XA9 2040 aa13.55□□□□□ -0.24
USB1-203ENST00000539737 USF3Q68DE3 2245 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 PLOD2O00469 737 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 ACOX3O15254 700 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 NME6O75414 186 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 HPNP05981 417 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 NAGAP17050 411 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 GPC1P35052 558 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 MC3RP41968 323 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 FRKP42685 505 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 CPA2P48052 419 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 EMDP50402 254 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 CLNS1AP54105 237 aaKnown RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 CLDN8P56748 225 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 ZNF155Q12901 538 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 HSPB3Q12988 150 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 LARP4Q71RC2 724 aaKnown RBP eCLIP13.54□□□□□ -0.24
USB1-203ENST00000539737 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 PM20D2Q8IYS1 436 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 OR2L13Q8N349 312 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 FAM83FQ8NEG4 500 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 OR7G2Q8NG99 324 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 CKAP2Q8WWK9 683 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 ADIPOR1Q96A54 375 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 CIDECQ96AQ7 238 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 NODALQ96S42 347 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 G6PC3Q9BUM1 346 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 BHLHE41Q9C0J9 482 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 UBTD1Q9HAC8 227 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 GALNT9Q9HCQ5 603 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
USB1-203ENST00000539737 KLHL28Q9NXS3 571 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 EDARQ9UNE0 448 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 PCDHGB3Q9Y5G1 929 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 USH1CQ9Y6N9 552 aa13.54□□□□□ -0.24
USB1-203ENST00000539737 FRG2CA6NGY1 282 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 CD8B2A6NJW9 211 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 TGDSO95455 350 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ABCD3P28288 659 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 EPHA3P29320 983 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 PTPN6P29350 595 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms