RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FAM227AF5H4B4 570 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 FCMRO60667 390 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 INMTO95050 263 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 KCNK2O95069 426 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 TNNI3P19429 210 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 ENDOUP21128 410 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 CD1CP29017 333 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 PTGER1P34995 402 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 HOXD12P35452 270 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 GIPRP48546 466 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 GP2P55259 537 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 GFERP55789 205 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 TUBA1BP68363 451 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 CDK5Q00535 292 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 ACY1Q03154 408 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 SQSTM1Q13501 440 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 DCTN2Q13561 401 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 C1DQ13901 141 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 NR0B2Q15466 257 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPARC-209ENST00000539687 FLYWCH1Q4VC44 716 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 KLHL22Q53GT1 634 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 MFSD4BQ5TF39 518 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 PLAG1Q6DJT9 500 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 TUBA1AQ71U36 451 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 GDF7Q7Z4P5 450 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 MRGPREQ86SM8 312 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 ZNF527Q8NB42 609 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 WDR36Q8NI36 951 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 YIPF6Q96EC8 236 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 TMEM80Q96HE8 168 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 SLC41A2Q96JW4 573 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 VSTM2LQ96N03 204 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 TRIM2Q9C040 744 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 QRSL1Q9H0R6 528 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 ZNF768Q9H5H4 540 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 CHCHD3Q9NX63 227 aaKnown RBP9.45□□□□□ -0.9
SPARC-209ENST00000539687 SELENONQ9NZV5 590 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPARC-209ENST00000539687 BAIAP2Q9UQB8 552 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 SLC35A3Q9Y2D2 325 aa9.45□□□□□ -0.9
SPARC-209ENST00000539687 A0A1B0GVT2 93 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 DSCR3O14972 297 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 SDC3O75056 442 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 DNAJB6O75190 326 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ATE1O95260 518 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 IFNA16P05015 189 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ANKRD34CP0C6C1 535 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 DRD5P21918 477 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ACVR2AP27037 513 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 PCSK6P29122 969 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 CSTF2P33240 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPARC-209ENST00000539687 SLC15A1P46059 708 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 OMPP47874 163 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 EMDP50402 254 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 RHAGQ02094 409 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 NHLH1Q02575 133 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 OCA2Q04671 838 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ST3GAL4Q11206 333 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 IRF3Q14653 427 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 GINS1Q14691 196 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 EXOSC7Q15024 291 aaKnown RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 ZNF141Q15928 474 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 SMN1Q16637 294 aaKnown RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 DGUOKQ16854 277 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 TIGD6Q17RP2 521 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 MRPL2Q5T653 305 aaKnown RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 Q6ZPB1 254 aaPredicted RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 CCDC103Q8IW40 242 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 CLIP4Q8N3C7 705 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 B3GNT7Q8NFL0 401 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 OR52L1Q8NGH7 329 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 OR9Q1Q8NGQ5 310 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 NAT6Q93015 286 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 PLEKHA8Q96JA3 519 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 SLC46A1Q96NT5 459 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 SH3GL3Q99963 347 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 MND1Q9BWT6 205 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ANKRA2Q9H9E1 313 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 PLGRKTQ9HBL7 147 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 PALMDQ9NP74 551 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 PRMT8Q9NR22 394 aaPredicted RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 SEMA4GQ9NTN9 838 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 TBC1D23Q9NUY8 699 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 UCKL1Q9NWZ5 548 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 ERGIC3Q9Y282 383 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 MED31Q9Y3C7 131 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 OR10H1Q9Y4A9 318 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
SPARC-209ENST00000539687 SNRNP200O75643 2136 aaKnown RBP9.44□□□□□ -0.9
SPARC-209ENST00000539687 MUC6Q6W4X9 2439 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 A0A1B0GTQ1 180 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 A0A1W2PPW3 197 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 EFCAB7A8K855 629 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 PRODHO43272 600 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 CHP2O43745 196 aa9.43□□□□□ -0.9
SPARC-209ENST00000539687 BCAS1O75363 584 aaPredicted RBP9.43□□□□□ -0.9
SPARC-209ENST00000539687 RCBTB2O95199 551 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms