RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 FLRT3Q9NZU0 649 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 BAIAP2L1Q9UHR4 511 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 PLEKHA6Q9Y2H5 1048 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 TRAF6Q9Y4K3 522 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 DNAJC15Q9Y5T4 150 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 AP4B1Q9Y6B7 739 aa11.21□□□□□ -0.61
CAPRIN1-213ENST00000533562 PCNX3Q9H6A9 2034 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 IGLV3-32A0A0A0MS00 114 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 GXYLT2A0PJZ3 443 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR2M5A3KFT3 312 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 C17orf51A8MQB3 221 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 TMEM114B3SHH9 223 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 NPHS1O60500 1241 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 NKX2-2O95096 273 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 RAF1P04049 648 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 SDC1P18827 310 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 MAP3K8P41279 467 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 PCYT1AP49585 367 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 RPL38P63173 70 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 OCRLQ01968 901 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 FGFBP1Q14512 234 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 GALNTL6Q49A17 601 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 KANK2Q63ZY3 851 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZCCHC12Q6PEW1 402 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 LRIG3Q6UXM1 1119 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 DDIASQ8IXT1 998 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 RIBC1Q8N443 379 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 BANPQ8N9N5 519 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 PIK3R3Q92569 461 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 HOXB13Q92826 284 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 STARD4Q96DR4 205 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 PGM2Q96G03 612 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 APOPT1Q96IL0 206 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 FCRL1Q96LA6 429 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 SLC39A3Q9BRY0 314 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 PINK1Q9BXM7 581 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 TUBB1Q9H4B7 451 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 NTMQ9P121 344 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 EIF3LQ9Y262 564 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF175Q9Y473 711 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF469Q96JG9 3925 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 H3BML4 177 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SEC14L5O43304 696 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 EMC8O43402 210 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 NDUFB5O43674 189 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 HSPA4LO95757 839 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 NGFRP08138 427 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 ALOX5P09917 674 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 BCKDHAP12694 445 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 HPGDP15428 266 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 MAPK1P28482 360 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 ALDH3A1P30838 453 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 LCN1P31025 176 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 CPOXP36551 454 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 RPL3P39023 403 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 FRKP42685 505 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SERPINB4P48594 390 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 CLDN15P56746 228 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 IFFO1Q0D2I5 559 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 PDE7AQ13946 482 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SGCBQ16585 318 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 GRAMD1BQ3KR37 738 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SZRD1Q7Z422 152 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 EXOC3L1Q86VI1 746 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR5M1Q8NGP8 315 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR6Y1Q8NGX8 325 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 CLHC1Q8NHS4 586 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 TWIST2Q8WVJ9 160 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 SMPDL3BQ92485 455 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 MS4A4EQ96PG1 132 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAM111AQ96PZ2 611 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 PLEKHF2Q9H8W4 249 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 ELOVL5Q9NYP7 299 aa11.19□□□□□ -0.62
CAPRIN1-213ENST00000533562 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 A0A087WZY1 265 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ALG1L2C9J202 215 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 H0YC42 278 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 SOX30O94993 753 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 IGKV1D-16P01601 117 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 HRGP04196 525 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 NUDT17P0C025 328 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 FCGR2AP12318 317 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 KLK2P20151 261 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms