RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ZNF550Q7Z398 422 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 MAVSQ7Z434 540 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 GOLGA7Q7Z5G4 137 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 MYLK4Q86YV6 388 aaPredicted RBP8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 OR52B6Q8NGF0 335 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 OR14L1PQ8NHC6 308 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 RNF138Q8WVD3 245 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 KCTD4Q8WVF5 259 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 PIGTQ969N2 578 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 NXNL1Q96CM4 212 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 CMTM5Q96DZ9 223 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 OMA1Q96E52 524 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 PIK3IP1Q96FE7 263 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 CCL19Q99731 98 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 EBF4Q9BQW3 602 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 MRPL1Q9BYD6 325 aaKnown RBP8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 OPN3Q9H1Y3 402 aaPredicted RBP8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 PIGMQ9H3S5 423 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 CXorf56Q9H5V9 222 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 METTL7AQ9H8H3 244 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 ANKRA2Q9H9E1 313 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 UBTD1Q9HAC8 227 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 NMRAL1Q9HBL8 299 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 OXSMQ9NWU1 459 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 EXO1Q9UQ84 846 aaKnown RBP8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 RAP2CQ9Y3L5 183 aa8.31□□□□□ -1.08
CHMP4A-205ENST00000531158 GOLGA8QA0A0J9YX86 632 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 GOLGA8OA6NCC3 632 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PRAMEF25A6NGN4 478 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 GOLGA8NF8WBI6 632 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 MSTNO14793 375 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 ZIC3O60481 467 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CRLF1O75462 422 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CBR3O75828 277 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CGAP01215 116 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 THBDP07204 575 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NID1P14543 1247 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NAGAP17050 411 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NT5EP21589 574 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 TCEA1P23193 301 aaKnown RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PIK3R1P27986 724 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 ARRB2P32121 409 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 UGT2B10P36537 528 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 KIR2DL2P43627 348 aaPredicted RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PTH2RP49190 550 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 EMDP50402 254 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 GAS1P54826 345 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NRG3P56975 720 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 MRPS35P82673 323 aaKnown RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 HMGCS1Q01581 520 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 SNTA1Q13424 505 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 BLMHQ13867 455 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 TRMT12Q53H54 448 aaKnown RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CFAP157Q5JU67 520 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 LIPJQ5W064 366 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CYP20A1Q6UW02 462 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 LRRC74BQ6ZQY2 392 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NUP54Q7Z3B4 507 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 IFNEQ86WN2 208 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PLD6Q8N2A8 252 aaKnown RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 L3MBTL4Q8NA19 623 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 ADCY4Q8NFM4 1077 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 OR7G1Q8NGA0 311 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 OR4K14Q8NGD5 310 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 ACTRT2Q8TDY3 377 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 DNAJC9Q8WXX5 260 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 FIG4Q92562 907 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 GPR78Q96P69 363 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 CCDC28BQ9BUN5 200 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 IPPKQ9H8X2 491 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 ACTR8Q9H981 624 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 NMRK1Q9NWW6 199 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 TAS2R10Q9NYW0 307 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 KLRF1Q9NZS2 232 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 EIF3LQ9Y262 564 aaKnown RBP8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 LRCH1Q9Y2L9 728 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
CHMP4A-205ENST00000531158 FOXE1O00358 373 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 CASKO14936 926 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 TO15178 435 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 HDAC3O15379 428 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 NPHS1O60500 1241 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SMNDC1O75940 238 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 KRT36O76013 467 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SOX30O94993 753 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SEMA3DO95025 777 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 CNOT4O95628 575 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 ATP1B1P05026 303 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 KLK1P06870 262 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 RPSAP08865 295 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 LTA4HP09960 611 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SRD5A2P31213 254 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms