RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	DTNBP1	Q96EV8	351 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	SFXN2	Q96NB2	322 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	TRIB1	Q96RU8	372 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	TUBA1C	Q9BQE3	449 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	G6PC3	Q9BUM1	346 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	DUSP26	Q9BV47	211 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	TBL1XR1	Q9BZK7	514 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	NEUROD4	Q9HD90	331 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	DUSP22	Q9NRW4	184 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	GPATCH2	Q9NW75	528 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	FBXO34	Q9NWN3	711 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	APC	P25054	2843 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	MBD3L3	A6NE82	208 aa	Predicted RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ALG1L2	C9J202	215 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362		H0Y3Z8	333 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	SDHD	O14521	159 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ANKRD28	O15084	1053 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ANGPTL1	O95841	491 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZNF708	P17019	499 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	LBP	P18428	481 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CHM	P24386	653 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CLK3	P49761	638 aa	Known RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZNF136	P52737	540 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CLDN18	P56856	261 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	SRY	Q05066	204 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	TP53BP2	Q13625	1128 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	GANAB	Q14697	944 aa	Known RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	PGS1	Q32NB8	556 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	LSM12	Q3MHD2	195 aa	Known RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	SPDYE7P	Q495Y7	208 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	RAET1L	Q5VY80	246 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR4F3	Q6IEY1	312 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	OGFOD2	Q6N063	350 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CDC73	Q6P1J9	531 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	AAGAB	Q6PD74	315 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	POMZP3	Q6PJE2	187 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	PLXDC2	Q6UX71	529 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ADGRE4P	Q86SQ3	457 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	LRRC34	Q8IZ02	419 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CLECL1	Q8IZS7	167 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	C9orf106	Q8NAJ2	232 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	RELL2	Q8NC24	303 aa	Predicted RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR5AK3P	Q8NH89	298 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	SFXN5	Q8TD22	340 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	C1GALT1C1	Q96EU7	318 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	STAC	Q99469	402 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	BTBD2	Q9BX70	525 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	ACTRT3	Q9BYD9	372 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	PIGU	Q9H490	435 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	CALHM2	Q9HA72	323 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	SDHAF3	Q9NRP4	125 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	THAP1	Q9NVV9	213 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	GIN1	Q9NXP7	522 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	NKIRAS1	Q9NYS0	192 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	KCNE3	Q9Y6H6	103 aa		10.65	□□□□□ -0.7
PSMC3-205	ENST00000528362	EML6	Q6ZMW3	1958 aa		10.65	□□□□□ -0.71
PSMC3-205	ENST00000528362	PKDREJ	Q9NTG1	2253 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	CSMD1	Q96PZ7	3565 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	RNASET2	O00584	256 aa	Known RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	HDAC3	O15379	428 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	CFLAR	O15519	480 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	SCN2B	O60939	215 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	IL2RA	P01589	272 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	ALDOC	P09972	364 aa	Known RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	HK1	P19367	917 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	TBXA2R	P21731	343 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	LCN1	P31025	176 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	SOAT1	P35610	550 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	DLX5	P56178	289 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	PHC1	P78364	1004 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	POU6F2	P78424	691 aa	Predicted RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	OCRL	Q01968	901 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	C17orf67	Q0P5P2	114 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	RCAN2	Q14206	197 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.64	□□□□□ -0.71	4e-6	■■■■□ 19.9
PSMC3-205	ENST00000528362	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	GATS	Q8NAP1	163 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	OR8J2	Q8NGG1	315 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	RAB3IL1	Q8TBN0	382 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	ARL8A	Q96BM9	186 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	TESC	Q96BS2	214 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	MOAP1	Q96BY2	351 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	CHMP6	Q96FZ7	201 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	KLHDC3	Q9BQ90	382 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	DPY30	Q9C005	99 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	SERHL2	Q9H4I8	314 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	PTGES2	Q9H7Z7	377 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	AIG1	Q9NVV5	245 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	MARCO	Q9UEW3	520 aa	Predicted RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	FAF1	Q9UNN5	650 aa	Predicted RBP	10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	CSMD2	Q7Z408	3487 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	NIN	Q8N4C6	2090 aa		10.64	□□□□□ -0.71
PSMC3-205	ENST00000528362	EXPH5	Q8NEV8	1989 aa		10.63	□□□□□ -0.71
PSMC3-205	ENST00000528362	NCKAP5	O14513	1909 aa		10.63	□□□□□ -0.71
PSMC3-205	ENST00000528362	OR2M5	A3KFT3	312 aa		10.63	□□□□□ -0.71
PSMC3-205	ENST00000528362	CLCA1	A8K7I4	914 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms