RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TCEAL2Q9H3H9 227 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 THAP9Q9H5L6 903 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SMYD3Q9H7B4 428 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FN3KRPQ9HA64 309 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 RDH14Q9HBH5 336 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SLC40A1Q9NP59 571 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ACKR4Q9NPB9 350 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 KCNJ16Q9NPI9 418 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 HAUS2Q9NVX0 235 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 P4HTMQ9NXG6 502 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ZNF629Q9UEG4 869 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 GAGE2DQ9UEU5 116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LNPEPQ9UIQ6 1025 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 STAP1Q9ULZ2 295 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 WBP11Q9Y2W2 641 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 ALG6Q9Y672 507 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 COMMD10Q9Y6G5 202 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 IKBKGQ9Y6K9 419 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TNRC6AQ8NDV7 1962 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 NYNRINQ9P2P1 1898 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 FER1L5A0AVI2 2057 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LRP4O75096 1905 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 SACSQ9NZJ4 4579 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ZFC3H1O60293 1989 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 CHD5Q8TDI0 1954 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CHD3Q12873 2000 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 USF3Q68DE3 2245 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 TMEM89A2RUT3 159 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GOLGA8IPA6NC78 632 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 OR5H15A6NDH6 313 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 TRIM49BA6NDI0 452 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 LRRIQ3A6PVS8 624 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 E7EQ34 232 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GOLGA8MH3BSY2 632 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C19orf84I3L1E1 186 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 IFRD1O00458 451 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 CLDN5O00501 218 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MED7O43513 233 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 HCRTO43612 131 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 KDELR3O43731 214 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 HCN1O60741 890 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 DIAPH2O60879 1101 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CDC123O75794 336 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 RECQL5O94762 991 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 CTDNEP1O95476 244 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 TRUB2O95900 331 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 SOD1P00441 154 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 IGHG3P01860 377 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CRHP06850 196 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RHOCP08134 193 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CSF3P09919 207 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ATP1A3P13637 1013 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CCDC130P13994 396 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PDGFRAP16234 1089 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 EFNA1P20827 205 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 PCMT1P22061 227 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 IL10P22301 178 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CA4P22748 312 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 OPRM1P35372 400 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ACTR1BP42025 376 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CD151P48509 253 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 STK19P49842 368 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ASCL1P50553 236 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 SGSHP51688 502 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GPR143P51810 404 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 METAP1P53582 386 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MAZP56270 477 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ACTR1AP61163 376 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RPL7AP62424 266 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ARG2P78540 354 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NUCB2P80303 420 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 DCDP81605 110 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ARF5P84085 180 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 VLDLRP98155 873 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PLOD1Q02809 727 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 GNA12Q03113 381 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ADIGQ0VDE8 80 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RALGDSQ12967 914 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C1orf61Q13536 156 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CEBPEQ15744 281 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CCNG2Q16589 344 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 KNOP1Q1ED39 458 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ZNF542PQ5EBM4 170 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ATP1A1-AS1Q5TC04 95 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GRTP1Q5TC63 336 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C20orf194Q5TEA3 1177 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GARNL3Q5VVW2 1013 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NIPAL1Q6NVV3 410 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PPP1R2P3Q6NXS1 205 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RFWD3Q6PCD5 774 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ARSKQ6UWY0 536 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NDUFAF7Q7L592 441 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ENOSF1Q7L5Y1 443 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MAATS1Q7Z4T9 603 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 TBC1D1Q86TI0 1168 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 LRRTM1Q86UE6 522 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 TAC4Q86UU9 113 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 VPS36Q86VN1 386 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NLRP14Q86W24 1093 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 OOSP2Q86WS3 158 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms