RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 AP3D1O14617 1153 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 FMO6PO60774 539 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 SEC14L2O76054 403 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 CBX7O95931 251 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 GASTP01350 101 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 GIMD1P0DJR0 217 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 AGXTP21549 392 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 EPHA2P29317 976 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 EPHA8P29322 1005 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ALDH4A1P30038 563 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 HOXD12P35452 270 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 STT3AP46977 705 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 PPM1FP49593 454 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ARL4DP49703 201 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 POU6F2P78424 691 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ST3GAL3Q11203 375 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 STX4Q12846 297 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 CAMK2BQ13554 666 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 TRAM2Q15035 370 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNHIT3Q15649 155 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 DCST2Q5T1A1 773 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 PGBD2Q6P3X8 592 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 KLHL17Q6TDP4 642 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 KANSL1Q7Z3B3 1105 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 RABEPKQ7Z6M1 372 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 RBM45Q8IUH3 476 aaKnown RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 CCDC71Q8IV32 467 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 P3H2Q8IVL5 708 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 BPIFB6Q8NFQ5 453 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR13F1Q8NGS4 319 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 CNIH3Q8TBE1 160 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC38A4Q969I6 547 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 OTUB1Q96FW1 271 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 RBM18Q96H35 190 aaKnown RBP12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC41A2Q96JW4 573 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 DOK1Q99704 481 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 ANKRA2Q9H9E1 313 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
DEPDC1B-206ENST00000512452 TP53BP1Q12888 1972 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 A0A1B0GTQ1 180 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 H3BMH7 237 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 H3BSA7 217 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 B4GAT1O43505 415 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 RGS10O43665 173 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PCDHGA12O60330 932 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR10H3O60404 316 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PRAMEF2O60811 474 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 WBP4O75554 376 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 CYP7B1O75881 506 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 MED26O95402 600 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 CTSBP07858 339 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 HTR1AP08908 422 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 CT62P0C5K7 136 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 NID1P14543 1247 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 GABRB1P18505 474 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 S1PR1P21453 382 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 DCKP27707 260 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 GCGRP47871 477 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PSMD4P55036 377 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 RGS8P57771 180 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR1D5P58170 312 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 TAS2R41P59536 307 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 EEF1A1P68104 462 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 CXADRP78310 365 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNF155Q12901 538 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC13A2Q13183 592 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PMS2P3Q13401 168 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 RAB39AQ14964 217 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SEC23BQ15437 767 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SHBQ15464 509 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 NPTX1Q15818 432 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 ENTPD8Q5MY95 495 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLX4IPQ5VYV7 408 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 XAF1Q6GPH4 301 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 C1orf94Q6P1W5 598 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PODNL1Q6PEZ8 512 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PRSS48Q7RTY5 328 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 VRK2Q86Y07 508 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR7G1Q8NGA0 311 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR52R1Q8NGF1 315 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 FAM81AQ8TBF8 368 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC7A13Q8TCU3 470 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 TRUB1Q8WWH5 349 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 DIO2Q92813 273 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 RIT1Q92963 219 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 MUL1Q969V5 352 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 TMIGD2Q96BF3 282 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PEX11GQ96HA9 241 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 DGAT2Q96PD7 388 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 DPYSL5Q9BPU6 564 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 BCL7BQ9BQE9 202 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 FANCEQ9HB96 536 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 MAN2C1Q9NTJ4 1040 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms