RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KCNJ8Q15842 424 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDO1Q16878 200 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 HACD4Q5VWC8 232 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACSM2BQ68CK6 577 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SEL1L3Q68CR1 1132 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CES5AQ6NT32 575 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SYCE2Q6PIF2 218 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 UQCC3Q6UW78 93 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM92BQ6ZTR7 304 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 LHFPL3Q86UP9 236 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM126BQ8IUX1 230 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 AMER3Q8N944 861 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SYT14Q8NB59 555 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR7D4Q8NG98 312 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR10S1Q8NGN2 331 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 RNASE11Q8TAA1 199 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASB5Q8WWX0 329 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASB15Q8WXK1 588 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MYLPFQ96A32 169 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FUBP1Q96AE4 644 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM45BQ96B21 275 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 UTP23Q9BRU9 249 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ST6GALNAC5Q9BVH7 336 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MANSC1Q9H8J5 431 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMBIM4Q9HC24 238 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PLK2Q9NYY3 685 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 RNF150Q9ULK6 438 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PIGLQ9Y2B2 252 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ATG2AQ2TAZ0 1938 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 DMDP11532 3685 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NCOR1O75376 2440 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MYO15AQ9UKN7 3530 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMCO3A2RU48 225 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM89A2RUT3 159 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CBY3A6NI87 242 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 C9orf172C9J069 976 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 M0QYG6 137 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 EPHB6O15197 1021 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SSX4O60224 188 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 GLRA1P23415 457 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ITGA3P26006 1051 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 DPP4P27487 766 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 RCVRNP35243 200 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 AQP2P41181 271 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 COMPP49747 757 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PKNOX1P55347 436 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 GNG2P59768 71 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PITPNAQ00169 270 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NAAAQ02083 359 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PAX5Q02548 391 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 OCA2Q04671 838 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 STX4Q12846 297 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 GPR17Q13304 367 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLBPQ14493 270 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 KRT33BQ14525 404 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMED2Q15363 201 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CCDC6Q16204 474 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NDUFAF6Q330K2 333 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CHRFAM7AQ494W8 412 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CXorf66Q5JRM2 361 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANKRD54Q6NXT1 300 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 DHRS4L2Q6PKH6 230 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM35AQ86V20 835 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 HS3ST5Q8IZT8 346 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM123Q8N131 208 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 STK40Q8N2I9 435 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM86AQ8N2M4 240 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MMGT1Q8N4V1 131 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FBXO36Q8NEA4 188 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ABHD11Q8NFV4 315 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR2L8Q8NGY9 312 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 VANGL1Q8TAA9 524 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 LMO3Q8TAP4 145 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 WFIKKN2Q8TEU8 576 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 CLEC4CQ8WTT0 213 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF480Q8WV37 535 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 RAB40AQ8WXH6 277 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 HGDQ93099 445 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 LHX4Q969G2 390 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TAMM41Q96BW9 452 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 COQ8BQ96D53 544 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 C12orf57Q99622 126 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRRT1Q99946 306 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ELOVL4Q9GZR5 314 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ALX4Q9H161 411 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 POMKQ9H5K3 350 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 C10orf88Q9H8K7 445 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM30AQ9NV96 361 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NCKIPSDQ9NZQ3 722 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NDRG2Q9UN36 371 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ABCG2Q9UNQ0 655 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FOXA2Q9Y261 457 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 YIPF1Q9Y548 306 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASB1Q9Y576 335 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 INSL5Q9Y5Q6 135 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms