RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 H2AFXP16104 143 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ZFP36L2P47974 494 aaKnown RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 POU6F2P78424 691 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 STX5Q13190 355 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 AAGABQ6PD74 315 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 FIGNL1Q6PIW4 674 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ENPP6Q6UWR7 440 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 APOOLQ6UXV4 268 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 SEM1Q6ZVN7 128 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 HDXQ7Z353 690 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 MARCH3Q86UD3 253 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 CLECL1Q8IZS7 167 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ACBD4Q8NC06 268 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ZNF75CPQ92670 426 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 CDS1Q92903 461 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 OTUB1Q96FW1 271 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 SH3GL2Q99962 352 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 DSN1Q9H410 356 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 VIPAS39Q9H9C1 493 aa20.54■□□□□ 0.88
SNIP1-203ENST00000493916 FAF1Q9UNN5 650 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-203ENST00000493916 ALG1L2C9J202 215 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 SCN2BO60939 215 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 OXSR1O95747 527 aaPredicted RBP20.53■□□□□ 0.88
SNIP1-203ENST00000493916 ANGPTL1O95841 491 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 KITP10721 976 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 TBXA2RP21731 343 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 CHMP24386 653 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 EPHA3P29320 983 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 TFF3Q07654 80 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 C17orf67Q0P5P2 114 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 TTMPQ5BVD1 217 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 ANXA8L1Q5VT79 327 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 NSUN5P2Q63ZY6 315 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 ZAR1Q86SH2 424 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 GALNT10Q86SR1 603 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 OR4C3Q8NH37 302 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 ZPLD1Q8TCW7 415 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 DUSP19Q8WTR2 217 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 MAELQ96JY0 434 aaKnown RBP20.53■□□□□ 0.88
SNIP1-203ENST00000493916 SFXN2Q96NB2 322 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 WDR55Q9H6Y2 383 aaPredicted RBP20.53■□□□□ 0.88
SNIP1-203ENST00000493916 RUBCNLQ9H714 662 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 PTGES2Q9H7Z7 377 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 MED11Q9P086 117 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 TEX15Q9BXT5 2789 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 FREM3P0C091 2139 aa20.53■□□□□ 0.88
SNIP1-203ENST00000493916 PRSS51A0A1B0GVH4 220 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 CD8B2A6NJW9 211 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 FAM90A27PA6NNH2 459 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 E9PBE3 544 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 TOXO94900 526 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 COX6B1P14854 86 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 SOAT1P35610 550 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 TIMP3P35625 211 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 LHX2P50458 406 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 B3GALT5-AS1P59052 145 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 CCNJQ5T5M9 372 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 VPS37AQ8NEZ2 397 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 OR4A15Q8NGL6 344 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 OR5AK3PQ8NH89 298 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 PIWIL2Q8TC59 973 aaKnown RBP20.52■□□□□ 0.88
SNIP1-203ENST00000493916 ADAMTS15Q8TE58 950 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 C1GALT1C1Q96EU7 318 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 CHMP6Q96FZ7 201 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 CALHM2Q9HA72 323 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 KCNJ16Q9NPI9 418 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 UBQLN4Q9NRR5 601 aa20.52■□□□□ 0.88
SNIP1-203ENST00000493916 GOLGA8QA0A0J9YX86 632 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 GOLGA8OA6NCC3 632 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 HSPB2A8KAH6 182 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 GOLGA8NF8WBI6 632 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 CEACAM8P31997 349 aaPredicted RBP20.51■□□□□ 0.87
SNIP1-203ENST00000493916 PHC1P78364 1004 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 HSPB2Q16082 182 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 SPANXN4Q5MJ08 99 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 ACTRT2Q8TDY3 377 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 SPOCK3Q9BQ16 436 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 TREX2Q9BQ50 279 aaPredicted RBP20.51■□□□□ 0.87
SNIP1-203ENST00000493916 UCK2Q9BZX2 261 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 FBXO34Q9NWN3 711 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 PCDHGB4Q9UN71 923 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 GPR45Q9Y5Y3 372 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 CACNA1CQ13936 2221 aa20.51■□□□□ 0.87
SNIP1-203ENST00000493916 RNF103-CHMP3A0A140T963 221 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 A0A1W2PQD3 144 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 NKX2-6A6NCS4 301 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 KDM4EB2RXH2 506 aaPredicted RBP20.5■□□□□ 0.87
SNIP1-203ENST00000493916 HK1P19367 917 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 RCAN2Q14206 197 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 BCL2A1Q16548 175 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 SLC25A35Q3KQZ1 300 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 FAM174BQ3ZCQ3 159 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 GLYR1Q49A26 553 aaPredicted RBP20.5■□□□□ 0.87
SNIP1-203ENST00000493916 DCST2Q5T1A1 773 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 MAVSQ7Z434 540 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 MISPQ8IVT2 679 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 TEX37Q96LM6 180 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 C7orf26Q96N11 449 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 OR7D2Q96RA2 312 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 TRIB1Q96RU8 372 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms