RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 XKP51811 444 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 SMSP52788 366 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 NXPH1P58417 271 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 RAB8AP61006 207 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 FUT5Q11128 374 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 ST3GAL4Q11206 333 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 GANABQ14697 944 aaKnown RBP7.89□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF846Q147U1 533 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 SEC23BQ15437 767 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 SHBQ15464 509 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 DECR1Q16698 335 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 INAVAQ3KP66 663 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF311Q5JNZ3 666 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 ARMC6Q6NXE6 501 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 TUBA3EQ6PEY2 450 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 C19orf48Q6RUI8 117 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM107Q6UX40 140 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 DEF8Q6ZN54 512 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 USP43Q70EL4 1123 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 KANSL1Q7Z3B3 1105 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 RD3Q7Z3Z2 195 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 ARHGAP22Q7Z5H3 698 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 MRGPREQ86SM8 312 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 CCDC103Q8IW40 242 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 PEX5LQ8IYB4 626 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 AMER2Q8N7J2 671 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 MINDY2Q8NBR6 621 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 KCT2Q8NC54 265 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 OR4K5Q8NGD3 323 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 OR5D16Q8NGK9 328 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 FNDC8Q8TC99 324 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 DYNC2LI1Q8TCX1 351 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 GNPDA2Q8TDQ7 276 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 SGCDQ92629 289 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 GGHQ92820 318 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 GIMAP5Q96F15 307 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 SLC6A18Q96N87 628 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 CSF3RQ99062 836 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 NRTNQ99748 197 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 NAA50Q9GZZ1 169 aaKnown RBP7.89□□□□□ -1.15
VTI1A-207ENST00000489357 IL21RQ9HBE5 538 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 C14orf105Q9NVL8 296 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 MRPS18AQ9NVS2 196 aaKnown RBP7.89□□□□□ -1.15
VTI1A-207ENST00000489357 POMT2Q9UKY4 750 aa7.89□□□□□ -1.15
VTI1A-207ENST00000489357 RP1P56715 2156 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MDC1Q14676 2089 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 COL5A1P20908 1838 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FAM181BA6NEQ2 426 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 AGAP5A6NIR3 686 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 GLOD5A6NK44 160 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 EFCAB9A8MZ26 197 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 H0YGG7 62 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 J3QW42 95 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 AP3D1O14617 1153 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SLC30A4O14863 429 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CTSVO60911 334 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 STX11O75558 287 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 DBIP07108 87 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SYPP08247 313 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 THEGLP0DJG4 465 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ADORA3P0DMS8 318 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CTSEP14091 401 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 POLR2CP19387 275 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ENDOUP21128 410 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FPR3P25089 353 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 GALNSP34059 522 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TGFBR2P37173 567 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FEN1P39748 380 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CLK1P49759 484 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ENTPD1P49961 510 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PRKAG1P54619 331 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 C21orf59P57076 290 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RAB38P57729 211 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TAS2R41P59536 307 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ARF3P61204 181 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CDK5Q00535 292 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 HHEXQ03014 270 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TSPAN31Q12999 210 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 EIF2B5Q13144 721 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TARDBPQ13148 414 aaKnown RBP eCLIP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 C1DQ13901 141 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FZD2Q14332 565 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ELOCQ15369 112 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SMN1Q16637 294 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TIGD6Q17RP2 521 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 DEFB134Q4QY38 66 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 KLHL22Q53GT1 634 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF628Q5EBL2 1059 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TPRG1LQ5T0D9 272 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FHL5Q5TD97 284 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MFSD4BQ5TF39 518 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 GARNL3Q5VVW2 1013 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RPL13AP3Q6NVV1 102 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PODNL1Q6PEZ8 512 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CCDC81Q6ZN84 652 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RASSF6Q6ZTQ3 369 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MED25Q71SY5 747 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RRM2BQ7LG56 351 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SLC46A3Q7Z3Q1 461 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PIP4P1Q86T03 277 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms