RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CYP3A5P20815 502 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UGT1A4P22310 534 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 STOMP27105 288 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 GJB2P29033 226 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UGT1A3P35503 534 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UGT1A5P35504 534 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 HSD17B3P37058 310 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SLC26A3P40879 764 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 AQP2P41181 271 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 GPR12P47775 334 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UQCRFS1P47985 274 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PLP1P60201 277 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 LCN2P80188 198 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SSBP2P81877 361 aaPredicted RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 SPCS2Q15005 226 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CHI3L2Q15782 390 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UAP1Q16222 522 aaPredicted RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 RBBP7Q16576 425 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SRSF7Q16629 238 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS41-212ENST00000482217 TCTN1Q2MV58 587 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PIK3CD-AS1Q5SR53 167 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 C10orf25Q5T742 122 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SEL1L2Q5TEA6 688 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 MORN5Q5VZ52 161 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 MBOAT1Q6ZNC8 495 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PLEKHG7Q6ZR37 379 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 ANKRD33Q7Z3H0 272 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 ARHGAP22Q7Z5H3 698 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 TAC4Q86UU9 113 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CROCCP3Q8IVE0 287 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 FUNDC1Q8IVP5 155 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS41-212ENST00000482217 IQCKQ8N0W5 287 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CSNK1A1LQ8N752 337 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 GJC3Q8NFK1 279 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 OR4C15Q8NGM1 316 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 OR10Q1Q8NGQ4 319 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 TMEM170AQ8WVE7 144 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 FAM3CQ92520 227 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SLC25A36Q96CQ1 311 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 RAB39BQ96DA2 213 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CMTM5Q96DZ9 223 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SH3YL1Q96HL8 342 aaPredicted RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 ZNF333Q96JL9 665 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 VSTM2LQ96N03 204 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 AMDHD1Q96NU7 426 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 FEM1AQ9BSK4 669 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PCGF1Q9BSM1 259 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SYT11Q9BT88 431 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 TSSK1BQ9BXA7 367 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 C1QTNF7Q9BXJ2 289 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 NEUROG2Q9H2A3 272 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 LHX5Q9H2C1 402 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 C1orf198Q9H425 327 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 RHOJQ9H4E5 214 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SLA2Q9H6Q3 261 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 THSD1Q9NS62 852 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 NLGN3Q9NZ94 848 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 TINAGQ9UJW2 476 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 IKZF3Q9UKT9 509 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PAIP2BQ9ULR5 123 aaKnown RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 PPIAL4AQ9Y536 164 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 ZMYM2Q9UBW7 1377 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 A0A0U1RQF3 1178 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 A0A1W2PPE3 182 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SMCO3A2RU48 225 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 MTMR11A4FU01 709 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 RNASEK-C17orf49H0YIS7 233 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 H3BN98 237 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 BTN3A3O00478 584 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CYB561D2O14569 222 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 RFXANKO14593 260 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 LIN7AO14910 233 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 RAB29O14966 203 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 MID1O15344 667 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 LDB2O43679 373 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SSX4O60224 188 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ATP6AP2O75787 350 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OR2J3O76001 311 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 EGFP01133 1207 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 APOEP02649 317 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 C9P02748 559 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 RPN2P04844 631 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SERPIND1P05546 499 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 GPIP06744 558 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ANXA5P08758 320 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SMIM18P0DKX4 95 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ACADSP16219 412 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 GOT1P17174 413 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 TSPAN8P19075 237 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 MMP11P24347 488 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CCNE1P24864 410 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OTX1P32242 354 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 AHRP35869 848 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 UGT2B10P36537 528 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 MAGEA6P43360 314 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 NKX2-1P43699 371 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 ATP1B3P54709 279 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms