RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 UGT2B17O75795 530 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 CYP7B1O75881 506 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 UTS2O95399 124 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 CSTAP01040 98 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 MT-ND1P03886 318 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SERPINA7P05543 415 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 NPIPA8P0DM63 369 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF23P17027 643 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 NAGAP17050 411 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SOX18P35713 384 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 MAP3K8P41279 467 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ID4P47928 161 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNJ5P48544 419 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 CCR4P51679 360 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SMIM11AP58511 58 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 COPZ1P61923 177 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SPIBQ01892 262 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 IL10RAQ13651 578 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 GRAMD1BQ3KR37 738 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 EXOSC6Q5RKV6 272 aaKnown RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 PDZK1Q5T2W1 519 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ABHD17BQ5VST6 288 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 RNF220Q5VTB9 566 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 BROXQ5VW32 411 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 DHRS4L2Q6PKH6 230 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 PLEKHM3Q6ZWE6 761 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ERMP1Q7Z2K6 904 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 HMGN2P46Q86SG4 172 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 VASH2Q86V25 355 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 DTX1Q86Y01 620 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 OR4N2Q8NGD1 307 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 OR5M3Q8NGP4 307 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 OR10Q1Q8NGQ4 319 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 RNF217Q8TC41 542 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 PHOSPHO1Q8TCT1 267 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ELP5Q8TE02 316 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 FGF11Q92914 225 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 DTNBP1Q96EV8 351 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 THOC3Q96J01 351 aaKnown RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SAP130Q9H0E3 1048 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 QRSL1Q9H0R6 528 aaKnown RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 METTL7AQ9H8H3 244 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 ZBTB20Q9HC78 741 aaPredicted RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 IL1RAPQ9NPH3 570 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 SDHAF3Q9NRP4 125 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 KLRF1Q9NZS2 232 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 KIF17Q9P2E2 1029 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 RPS6KB2Q9UBS0 482 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 DNAJB9Q9UBS3 223 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 YARS2Q9Y2Z4 477 aaKnown RBP9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 KNTC1P50748 2209 aa9.48□□□□□ -0.89
PRPF38A-202ENST00000474048 GVINP1Q7Z2Y8 2422 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PTPRZ1P23471 2315 aaPredicted RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 A0A1W2PQ72 361 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PRAMEF27A3QJZ7 478 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 FAM47E-STBD1D6RA91 191 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 CLOCKO15516 846 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 RRP8O43159 456 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 NDUFB5O43674 189 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ITGA10O75578 1167 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 OR2J2O76002 312 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 NUDT14O95848 222 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PRKAR1AP10644 381 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 UBL4AP11441 157 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 OR1E2P47887 323 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TAS2R41P59536 307 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNJ10P78508 379 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TGIF1Q15583 401 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ATP6AP1Q15904 470 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 MEP1AQ16819 746 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 MRPL2Q5T653 305 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TCTN3Q6NUS6 607 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF836Q6ZNA1 936 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 RRM2BQ7LG56 351 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 OLIG3Q7RTU3 272 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF550Q7Z398 422 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 NUP54Q7Z3B4 507 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 RPS19BP1Q86WX3 136 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 MISPQ8IVT2 679 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 FAM86B1Q8N7N1 296 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PAPD5Q8NDF8 572 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PIK3C3Q8NEB9 887 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 FAM110BQ8TC76 370 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 PHF10Q8WUB8 498 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 LRTOMTQ8WZ04 291 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 CENPNQ96H22 339 aaPredicted RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 C9orf16Q9BUW7 83 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 FNDC11Q9BVV2 318 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 CDCP1Q9H5V8 836 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 LIN28AQ9H9Z2 209 aaKnown RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 KRCC1Q9NPI7 259 aaPredicted RBP9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 HPF1Q9NWY4 346 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TESQ9UGI8 421 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms