RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 C17orf67Q0P5P2 114 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 POU4F3Q15319 338 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 RNF165Q6ZSG1 346 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 ZCCHC23Q6ZST2 131 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 CDRT4Q8N9R6 151 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 TCP10LQ8TDR4 215 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 JADE3Q92613 823 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 OTUB1Q96FW1 271 aaPredicted RBP19.67■□□□□ 0.74
TTC28-204ENST00000468807 MS4A4EQ96PG1 132 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 PIGQQ9BRB3 760 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 PINK1Q9BXM7 581 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 GIMAP2Q9UG22 337 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 MTORP42345 2549 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 PRRC2AP48634 2157 aaKnown RBP19.66■□□□□ 0.74
TTC28-204ENST00000468807 NUDT17P0C025 328 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 BCKDHAP12694 445 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 HPCAL1P37235 193 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 ASMTP46597 345 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 EEF1A1P68104 462 aaKnown RBP19.66■□□□□ 0.74
TTC28-204ENST00000468807 SIRPAP78324 504 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 EEF1A1P5Q5VTE0 462 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 OR2A2Q6IF42 318 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 PPP4R4Q6NUP7 873 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 FIGNL1Q6PIW4 674 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 GATSQ8NAP1 163 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 CHMP6Q96FZ7 201 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 ZNF764Q96H86 408 aaPredicted RBP19.66■□□□□ 0.74
TTC28-204ENST00000468807 VDAC3Q9Y277 283 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 VPS13CQ709C8 3753 aa19.66■□□□□ 0.74
TTC28-204ENST00000468807 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 TMEM114B3SHH9 223 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 SHISA8B8ZZ34 492 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 TBX19O60806 448 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 PEX11AO75192 247 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 TNFSF13O75888 250 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 NKX2-2O95096 273 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 ACP2P11117 423 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 DDX5P17844 614 aaKnown RBP19.65■□□□□ 0.74
TTC28-204ENST00000468807 SUCLG1P53597 346 aaKnown RBP19.65■□□□□ 0.74
TTC28-204ENST00000468807 RIPPLY3P57055 190 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 PRR5P85299 388 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 PDE7AQ13946 482 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 APOOLQ6UXV4 268 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 R3HCC1LQ7Z5L2 792 aaKnown RBP19.65■□□□□ 0.74
TTC28-204ENST00000468807 FIG4Q92562 907 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 PPP3R2Q96LZ3 170 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 FOXC2Q99958 501 aa19.65■□□□□ 0.74
TTC28-204ENST00000468807 ACSS1Q9NUB1 689 aaPredicted RBP19.65■□□□□ 0.74
TTC28-204ENST00000468807 ZNF469Q96JG9 3925 aaPredicted RBP19.64■□□□□ 0.74
TTC28-204ENST00000468807 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 SH3D21A4FU49 640 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 A8MXE2 369 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 LINC01387J3KSC0 135 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 EMC8O43402 210 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 NDUFB5O43674 189 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 SKAP2O75563 359 aaPredicted RBP19.64■□□□□ 0.73
TTC28-204ENST00000468807 SLU7O95391 586 aaKnown RBP19.64■□□□□ 0.73
TTC28-204ENST00000468807 FGF4P08620 206 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 ALOX5P09917 674 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 HPGDP15428 266 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 MAPK1P28482 360 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 CLDN15P56746 228 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 CLDN20P56880 219 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 UGT3A2Q3SY77 523 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 MFSD12Q6NUT3 480 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 VWA1Q6PCB0 445 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 HOMEZQ8IX15 550 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 SLC16A11Q8NCK7 471 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 CHDHQ8NE62 594 aaPredicted RBP19.64■□□□□ 0.73
TTC28-204ENST00000468807 MTERF3Q96E29 417 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 GIMAP5Q96F15 307 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 C16orf58Q96GQ5 468 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 ZNF845Q96IR2 970 aaPredicted RBP19.64■□□□□ 0.73
TTC28-204ENST00000468807 DACH2Q96NX9 599 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 C1orf50Q9BV19 199 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 ZCCHC3Q9NUD5 404 aaKnown RBP19.64■□□□□ 0.73
TTC28-204ENST00000468807 LGALS13Q9UHV8 139 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 SNX8Q9Y5X2 465 aa19.64■□□□□ 0.73
TTC28-204ENST00000468807 CASKO14936 926 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 KCNK2O95069 426 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 OXSR1O95747 527 aaPredicted RBP19.63■□□□□ 0.73
TTC28-204ENST00000468807 FRKP42685 505 aaPredicted RBP19.63■□□□□ 0.73
TTC28-204ENST00000468807 RPS3AP61247 264 aaKnown RBP19.63■□□□□ 0.73
TTC28-204ENST00000468807 PON3Q15166 354 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 SGCBQ16585 318 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 DUSP5Q16690 384 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 ATP6AP1LQ52LC2 224 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 CCNJQ5T5M9 372 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 PAMR1Q6UXH9 720 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 LRIG3Q6UXM1 1119 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 COX18Q8N8Q8 333 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 OR7A2PQ8NGA2 310 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 OR4C3Q8NH37 302 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 FNDC9Q8TBE3 224 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 PGM2Q96G03 612 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 NDRG3Q9UGV2 375 aa19.63■□□□□ 0.73
TTC28-204ENST00000468807 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 MSTNO14793 375 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 SCAMP2O15127 329 aaKnown RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 TNFRSF21O75509 655 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms