RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DUS3LQ96G46 650 aaKnown RBP4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CPB2Q96IY4 423 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 C12orf42Q96LP6 360 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 FMO2Q99518 471 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 P2RY13Q9BPV8 354 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF251Q9BRH9 671 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ALG8Q9BVK2 526 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ALOXE3Q9BYJ1 711 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 PANK2Q9BZ23 570 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CIPCQ9C0C6 399 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPFFR1Q9GZQ6 430 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 SDCBP2Q9H190 292 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC38A1Q9H2H9 487 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 TRIM45Q9H8W5 580 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 GALNT9Q9HCQ5 603 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CNGB3Q9NQW8 809 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 SEMA4GQ9NTN9 838 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 MIOSQ9NXC5 875 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 PLEK2Q9NYT0 353 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ABCD2Q9UBJ2 740 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CLN8Q9UBY8 286 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRWD1Q9UFC0 647 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CLEC2DQ9UHP7 191 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 MRM2Q9UI43 246 aaKnown RBP4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 C3orf18Q9UK00 162 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 FBXL2Q9UKC9 423 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 PILRAQ9UKJ1 303 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNF6Q9Y252 685 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 PRG3Q9Y2Y8 225 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF175Q9Y473 711 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 RIPK3Q9Y572 518 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 TIMM10BQ9Y5J6 103 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 FKBP7Q9Y680 259 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 FHOD3Q2V2M9 1422 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 AK9Q5TCS8 1911 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 PNPLA6Q8IY17 1366 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 CCDC7Q96M83 1385 aa4.01□□□□□ -1.77
HMGB3P21-201ENST00000452483 TRBV5-7A0A0A0MS05 114 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 BTBD19C9JJ37 291 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 DIRC3C9JPN6 131 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRRN3E7EW58 273 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNASEK-C17orf49H0YIS7 233 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 KLRC4-KLRK1H3BQV0 150 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PGRMC1O00264 195 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CYB561D2O14569 222 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 AIM2O14862 343 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 MID1O15344 667 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 XRCC2O43543 280 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 DENRO43583 198 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 AIREO43918 545 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ENTPD5O75356 428 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 KRT33AO76009 404 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRATO95237 230 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 FADS2O95864 444 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 WDPCPO95876 746 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 MT-CO3P00414 261 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 IFNA6P05013 189 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ANXA5P08758 320 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 MYL2P10916 166 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 UGT1A4P22310 534 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CFL1P23528 166 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 BDKRB2P30411 391 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 UGT1A3P35503 534 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CFHR2P36980 270 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 HPCAL1P37235 193 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NOVA1P51513 510 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 EFNB2P52799 333 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 UCNP55089 124 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TAS2R38P59533 333 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 AP3S2P59780 193 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 RAB10P61026 200 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 VSNL1P62760 191 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ADARB1P78563 741 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PITPNAQ00169 270 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 EWSR1Q01844 656 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NAAAQ02083 359 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF415Q09FC8 603 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 FOXE3Q13461 319 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PKP1Q13835 747 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PHKG1Q16816 387 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 KCTD18Q6PI47 426 aaPredicted RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 DPY19L2P2Q6ZN68 376 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRRC55Q6ZSA7 311 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TFAP2DQ7Z6R9 452 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM17Q86X19 198 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PALB2Q86YC2 1186 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 MARCH9Q86YJ5 346 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CRLF3Q8IUI8 442 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZBED8Q8IZ13 594 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PELI3Q8N2H9 469 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PRSS35Q8N3Z0 413 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRRC75AQ8NAA5 344 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NECAP1Q8NC96 275 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PPFIBP2Q8ND30 876 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF680Q8NEM1 530 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NFAM1Q8NET5 270 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms