RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MRTO4Q9UKD2 239 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 ABCA4P78363 2273 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 AKAP6Q13023 2319 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF195O14628 629 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 SCO2O43819 266 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 KCNH1O95259 989 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 ALOX5P09917 674 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 LBPP18428 481 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 CHMP24386 653 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 MSX1P28360 303 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 LCN1P31025 176 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 DSCR4P56555 118 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 CLDN15P56746 228 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 CLDN18P56856 261 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 TMEM44Q2T9K0 475 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 AGBL2Q5U5Z8 902 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 OR4F3Q6IEY1 312 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 WDR75Q8IWA0 830 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 OR14L1PQ8NHC6 308 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 FBXO30Q8TB52 745 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 TESCQ96BS2 214 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 STACQ99469 402 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 TUBA1CQ9BQE3 449 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 BTBD2Q9BX70 525 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 MANSC1Q9H8J5 431 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 SDHAF3Q9NRP4 125 aa12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 ZCCHC3Q9NUD5 404 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-204ENST00000449062 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 PRSS51A0A1B0GVH4 220 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MBD3L4A6NDZ8 208 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MBD3L5A6NJ08 208 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 HSPB2A8KAH6 182 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 NPIPB9F8W1W9 429 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 KLF11O14901 512 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 HDAC3O15379 428 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 SNRPB2P08579 225 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 COX6B1P14854 86 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF708P17019 499 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 PRIM2P49643 509 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 DLX5P56178 289 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 C17orf67Q0P5P2 114 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 LASP1Q14847 261 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 HSPB2Q16082 182 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 CDC73Q6P1J9 531 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 FIGNL1Q6PIW4 674 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MAVSQ7Z434 540 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 GALNT10Q86SR1 603 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 LACC1Q8IV20 430 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 CLECL1Q8IZS7 167 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 OR56A1Q8NGH5 318 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MBD3L2Q8NHZ7 208 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 SFXN5Q8TD22 340 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MGARPQ8TDB4 240 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 OTUB1Q96FW1 271 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 MAELQ96JY0 434 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 KLHDC3Q9BQ90 382 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 ACTRT3Q9BYD9 372 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 SERHL2Q9H4I8 314 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 CAMK2AQ9UQM7 478 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 SNX8Q9Y5X2 465 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 HCFC1P51610 2035 aa12.74□□□□□ -0.37
RTFDC1-204ENST00000449062 KIAA1549Q9HCM3 1950 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 SYT5O00445 386 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 SOX30O94993 753 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 IL12AP29459 219 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 RFX3P48380 749 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF136P52737 540 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 POU6F2P78424 691 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 SLC25A35Q3KQZ1 300 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ENPP6Q6UWR7 440 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 IFNEQ86WN2 208 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 OR4K17Q8NGC6 315 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF75CPQ92670 426 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 CDS1Q92903 461 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 MOAP1Q96BY2 351 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 C1GALT1C1Q96EU7 318 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 DPY30Q9C005 99 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 NEUROD4Q9HD90 331 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 UBQLN4Q9NRR5 601 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms