RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 MEAF6Q9HAF1 191 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 THAP1Q9NVV9 213 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 NKIRAS1Q9NYS0 192 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 MARCOQ9UEW3 520 aaPredicted RBP13.38□□□□□ -0.27
USE1-202ENST00000445667 KCNE3Q9Y6H6 103 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 HSPB2A8KAH6 182 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 H0Y3Z8 333 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 SDHDO14521 159 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
USE1-202ENST00000445667 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
USE1-202ENST00000445667 IL2RAP01589 272 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 HK1P19367 917 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 CHMP24386 653 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 MSX1P28360 303 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 TIMP3P35625 211 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 B3GALT5-AS1P59052 145 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 POU6F2P78424 691 aaPredicted RBP13.37□□□□□ -0.27
USE1-202ENST00000445667 C17orf67Q0P5P2 114 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 RCAN2Q14206 197 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 SF3B4Q15427 424 aaKnown RBP eCLIP13.37□□□□□ -0.27
USE1-202ENST00000445667 HSPB2Q16082 182 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.37□□□□□ -0.27
USE1-202ENST00000445667 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 KIRREL3Q8IZU9 778 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 CLEC4FQ8N1N0 589 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 GATSQ8NAP1 163 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 OR56A1Q8NGH5 318 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 OR5M1Q8NGP8 315 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 ZPLD1Q8TCW7 415 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 BTBD2Q9BX70 525 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 PIGUQ9H490 435 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 WDR55Q9H6Y2 383 aaPredicted RBP13.37□□□□□ -0.27
USE1-202ENST00000445667 PTGES2Q9H7Z7 377 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 CALHM2Q9HA72 323 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 DUSP22Q9NRW4 184 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 GPATCH2Q9NW75 528 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 MED12Q93074 2177 aa13.37□□□□□ -0.27
USE1-202ENST00000445667 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 GOLGA8QA0A0J9YX86 632 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 GOLGA8OA6NCC3 632 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 CD8B2A6NJW9 211 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 GOLGA8NF8WBI6 632 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ANKRD28O15084 1053 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ALDOCP09972 364 aaKnown RBP13.36□□□□□ -0.27
USE1-202ENST00000445667 TBXA2RP21731 343 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 BMP5P22003 454 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 SOAT1P35610 550 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 AGFG1P52594 562 aaKnown RBP13.36□□□□□ -0.27
USE1-202ENST00000445667 ZNF136P52737 540 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 NME5P56597 212 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 CLDN18P56856 261 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 PHC1P78364 1004 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 AGBL2Q5U5Z8 902 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 RAET1LQ5VY80 246 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 GDF7Q7Z4P5 450 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
USE1-202ENST00000445667 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 SFXN5Q8TD22 340 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ADAMTS15Q8TE58 950 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 STACQ99469 402 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 G6PC3Q9BUM1 346 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 NEUROD4Q9HD90 331 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 GIN1Q9NXP7 522 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 FAF1Q9UNN5 650 aaPredicted RBP13.36□□□□□ -0.27
USE1-202ENST00000445667 ZNF337Q9Y3M9 751 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ITPR2Q14571 2701 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
USE1-202ENST00000445667 ARHGAP21Q5T5U3 1957 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 NPIPA5A0A0B4J1W7 369 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 MBD3L4A6NDZ8 208 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 MBD3L3A6NE82 208 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 MBD3L5A6NJ08 208 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 CLCA1A8K7I4 914 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 SHISA8B8ZZ34 492 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 NPIPA7E9PJI5 369 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 HDAC3O15379 428 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 NDUFB5O43674 189 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 SCN2BO60939 215 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 NPIPA8P0DM63 369 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 HPGDP15428 266 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 IGFBP2P18065 325 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 EPHA3P29320 983 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 DLX5P56178 289 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 SNTB1Q13884 538 aaKnown RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 SLC25A35Q3KQZ1 300 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 POMZP3Q6PJE2 187 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 ARSKQ6UWY0 536 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 ANKRD46Q86W74 232 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms